Analysis of Ligand-Protein Contacts in PDB entry:
1YQD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 1YQD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ZN
A
1000 1ZINC ION
lig 2
ZN
A
2000 1ZINC ION
lig 3
NAP
A
500 48NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHO
lig 4
DTT
A
700 82,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 5
ZN
B
3000 1ZINC ION
lig 6
ZN
B
4000 1ZINC ION
lig 7
NAP
B
600 48NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHO
lig 8
DTT
B
800 82,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 9
GOL
B
900 6GLYCEROL