Analysis of Ligand-Protein Contacts in PDB entry:
1YQW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 42 ligands in PDB entry 1YQW. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SF4
A
265 8IRON/SULFUR CLUSTER
lig 2
F3S
A
266 7FE3-S4 CLUSTER
lig 3
SF4
A
267 8IRON/SULFUR CLUSTER
lig 4
GOL
A
268 6GLYCEROL
lig 5
GOL
A
269 6GLYCEROL
lig 6
GOL
A
270 6GLYCEROL
lig 7
NI
Q
551 1NICKEL (II) ION
lig 8
FE2
Q
553 1FE (II) ION
lig 9
BCT
Q
554 4BICARBONATE ION
lig 10
MG
Q
555 1MAGNESIUM ION
lig 11
MG
Q
556 1MAGNESIUM ION
lig 12
FCO
Q
550 7CARBONMONOXIDE-(DICYANO) IRON
lig 13
PER
Q
552 2PEROXIDE ION
lig 14
GOL
Q
557 6GLYCEROL
lig 15
GOL
Q
558 6GLYCEROL
lig 16
GOL
Q
559 6GLYCEROL
lig 17
GOL
Q
560 6GLYCEROL
lig 18
SF4
B
265 8IRON/SULFUR CLUSTER
lig 19
F3S
B
266 7FE3-S4 CLUSTER
lig 20
SF4
B
267 8IRON/SULFUR CLUSTER
lig 21
NI
R
551 1NICKEL (II) ION
lig 22
FE2
R
553 1FE (II) ION
lig 23
MG
R
1308 1MAGNESIUM ION
lig 24
FCO
R
550 7CARBONMONOXIDE-(DICYANO) IRON
lig 25
PER
R
552 2PEROXIDE ION
lig 26
GOL
R
1301 6GLYCEROL
lig 27
GOL
R
1302 6GLYCEROL
lig 28
GOL
R
1303 6GLYCEROL
lig 29
GOL
R
1304 6GLYCEROL
lig 30
GOL
R
1305 6GLYCEROL
lig 31
GOL
R
1306 6GLYCEROL
lig 32
GOL
R
1307 6GLYCEROL
lig 33
SF4
C
265 8IRON/SULFUR CLUSTER
lig 34
F3S
C
266 7FE3-S4 CLUSTER
lig 35
SF4
C
267 8IRON/SULFUR CLUSTER
lig 36
NI
S
551 1NICKEL (II) ION
lig 37
FE2
S
553 1FE (II) ION
lig 38
FCO
S
550 7CARBONMONOXIDE-(DICYANO) IRON
lig 39
PER
S
552 2PEROXIDE ION
lig 40
GOL
S
2301 6GLYCEROL
lig 41
GOL
S
2302 6GLYCEROL
lig 42
GOL
S
2303 6GLYCEROL