Analysis of Ligand-Protein Contacts in PDB entry:
1YRQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 36 ligands in PDB entry 1YRQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SF4
A
265 8IRON/SULFUR CLUSTER
lig 2
F3S
A
266 7FE3-S4 CLUSTER
lig 3
SF4
A
267 8IRON/SULFUR CLUSTER
lig 4
NI
H
551 1NICKEL (II) ION
lig 5
MG
H
553 1MAGNESIUM ION
lig 6
FCO
H
550 7CARBONMONOXIDE-(DICYANO) IRON
lig 7
SF4
B
265 8IRON/SULFUR CLUSTER
lig 8
F3S
B
266 7FE3-S4 CLUSTER
lig 9
SF4
B
267 8IRON/SULFUR CLUSTER
lig 10
NI
I
551 1NICKEL (II) ION
lig 11
MG
I
553 1MAGNESIUM ION
lig 12
FCO
I
550 7CARBONMONOXIDE-(DICYANO) IRON
lig 13
SF4
C
265 8IRON/SULFUR CLUSTER
lig 14
F3S
C
266 7FE3-S4 CLUSTER
lig 15
SF4
C
267 8IRON/SULFUR CLUSTER
lig 16
NI
J
551 1NICKEL (II) ION
lig 17
MG
J
553 1MAGNESIUM ION
lig 18
FCO
J
550 7CARBONMONOXIDE-(DICYANO) IRON
lig 19
SF4
D
265 8IRON/SULFUR CLUSTER
lig 20
F3S
D
266 7FE3-S4 CLUSTER
lig 21
SF4
D
267 8IRON/SULFUR CLUSTER
lig 22
NI
K
551 1NICKEL (II) ION
lig 23
MG
K
553 1MAGNESIUM ION
lig 24
FCO
K
550 7CARBONMONOXIDE-(DICYANO) IRON
lig 25
SF4
F
265 8IRON/SULFUR CLUSTER
lig 26
F3S
F
266 7FE3-S4 CLUSTER
lig 27
SF4
F
267 8IRON/SULFUR CLUSTER
lig 28
NI
M
551 1NICKEL (II) ION
lig 29
MG
M
553 1MAGNESIUM ION
lig 30
FCO
M
550 7CARBONMONOXIDE-(DICYANO) IRON
lig 31
SF4
G
265 8IRON/SULFUR CLUSTER
lig 32
F3S
G
266 7FE3-S4 CLUSTER
lig 33
SF4
G
267 8IRON/SULFUR CLUSTER
lig 34
NI
N
551 1NICKEL (II) ION
lig 35
MG
N
553 1MAGNESIUM ION
lig 36
FCO
N
550 7CARBONMONOXIDE-(DICYANO) IRON