Analysis of Ligand-Protein Contacts in PDB entry:
1YVP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 1YVP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
IU
C
3 215-IODOURIDINE-5'-MONOPHOSPHATE
lig 2
IU
D
1 185-IODOURIDINE-5'-MONOPHOSPHATE
lig 3
IU
D
2 215-IODOURIDINE-5'-MONOPHOSPHATE
lig 4
IU
D
6 215-IODOURIDINE-5'-MONOPHOSPHATE
lig 5
IU
E
3 215-IODOURIDINE-5'-MONOPHOSPHATE
lig 6
IU
F
1 185-IODOURIDINE-5'-MONOPHOSPHATE
lig 7
IU
F
2 215-IODOURIDINE-5'-MONOPHOSPHATE
lig 8
IU
F
6 215-IODOURIDINE-5'-MONOPHOSPHATE
lig 9
ACT
A
2001 4ACETATE ION
lig 10
MG
A
1001 1MAGNESIUM ION
lig 11
ACT
B
2002 4ACETATE ION
lig 12
MG
B
1002 1MAGNESIUM ION