Analysis of Ligand-Protein Contacts in PDB entry:
1YYM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 1YYM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MPT
M
1 5BETA-MERCAPTOPROPIONIC ACID
lig 2
VLM
M
27 8VALINYLAMINE
lig 3
MPT
S
1001 5BETA-MERCAPTOPROPIONIC ACID
lig 4
VLM
S
1027 8VALINYLAMINE
lig 5
NAG
G
588 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
G
734 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
741 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
G
762 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
G
776 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
G
789 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
G
795 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
886 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
EDO
G
903 41,2-ETHANEDIOL
lig 14
IPA
G
901 4ISOPROPYL ALCOHOL
lig 15
EDO
M
904 41,2-ETHANEDIOL
lig 16
NAG
P
1588 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
P
1734 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
P
1741 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
P
1762 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
P
1776 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
P
1789 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
P
1795 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
P
1886 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
IPA
P
902 4ISOPROPYL ALCOHOL