Analysis of Ligand-Protein Contacts in PDB entry:
25IH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 41 ligands in PDB entry 25IH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NH2
D
67 1AMINO GROUP
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 5
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
B
8 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
B
9 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
G
6 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
G
7 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
G
8 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
G
9 11ALPHA-D-MANNOPYRANOSE
lig 22
NAG
A
2001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
A
2002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
A
2003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
9Z9
A
2004 39 (METHOXYMETHYL)BUTOXY]SPIROST-5-EN
lig 26
PCW
A
2005 441,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 27
Y01
A
2006 35CHOLESTEROL HEMISUCCINATE
lig 28
CLR
A
2007 28CHOLESTEROL
lig 29
PCW
A
2008 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 30
PCW
A
2009 411,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 31
P5S
A
2010 35 PROPYL]OXY}(HYDROXY)PHOSPHORYL]-L-SERINE
lig 32
LPE
A
2011 221-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
Y01
A
2012 35CHOLESTEROL HEMISUCCINATE
lig 34
P3X
A
2013 41 HEXADECANOATE
lig 35
Y01
A
2014 35CHOLESTEROL HEMISUCCINATE
lig 36
PCW
A
2015 431,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 37
NAG
C
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
C
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
C
303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
PCW
D
101 361,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 41
PT5
D
102 55 ICOSA-5,8,11,14-TETRAENOATE