Analysis of Ligand-Protein Contacts in PDB entry:
25IJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 25IJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NH2
B
26 1AMINO GROUP
lig 2
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 5
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
D
8 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
D
9 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
A
2001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
A
2002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
A
2003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
A
2004 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
9Z9
A
2005 39 (METHOXYMETHYL)BUTOXY]SPIROST-5-EN
lig 18
PCW
A
2006 481,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
Y01
A
2007 35CHOLESTEROL HEMISUCCINATE
lig 20
Y01
A
2008 35CHOLESTEROL HEMISUCCINATE
lig 21
PCW
A
2009 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 22
PCW
A
2010 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE