Analysis of Ligand-Protein Contacts in PDB entry:
2AFI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 36 ligands in PDB entry 2AFI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
HCA
A
494 143-HYDROXY-3-CARBOXY-ADIPIC ACID
lig 2
CFN
A
496 18FE(7)-MO-S(9)-N CLUSTER
lig 3
CA
B
2492 1CALCIUM ION
lig 4
CA
B
4492 1CALCIUM ION
lig 5
CLF
B
1498 15FE(8)-S(7) CLUSTER
lig 6
HCA
C
494 143-HYDROXY-3-CARBOXY-ADIPIC ACID
lig 7
CFN
C
496 18FE(7)-MO-S(9)-N CLUSTER
lig 8
CLF
D
3498 15FE(8)-S(7) CLUSTER
lig 9
MG
E
1291 1MAGNESIUM ION
lig 10
ADP
E
1292 27ADENOSINE-5'-DIPHOSPHATE
lig 11
MG
F
2291 1MAGNESIUM ION
lig 12
SF4
F
1290 8IRON/SULFUR CLUSTER
lig 13
ADP
F
2292 27ADENOSINE-5'-DIPHOSPHATE
lig 14
MG
G
3291 1MAGNESIUM ION
lig 15
SF4
G
3290 8IRON/SULFUR CLUSTER
lig 16
ADP
G
3292 27ADENOSINE-5'-DIPHOSPHATE
lig 17
MG
H
4291 1MAGNESIUM ION
lig 18
ADP
H
4292 27ADENOSINE-5'-DIPHOSPHATE
lig 19
HCA
I
494 143-HYDROXY-3-CARBOXY-ADIPIC ACID
lig 20
CFN
I
496 18FE(7)-MO-S(9)-N CLUSTER
lig 21
CA
J
8492 1CALCIUM ION
lig 22
CLF
J
5498 15FE(8)-S(7) CLUSTER
lig 23
HCA
K
494 143-HYDROXY-3-CARBOXY-ADIPIC ACID
lig 24
CFN
K
496 18FE(7)-MO-S(9)-N CLUSTER
lig 25
CA
L
6492 1CALCIUM ION
lig 26
CLF
L
7498 15FE(8)-S(7) CLUSTER
lig 27
MG
M
5291 1MAGNESIUM ION
lig 28
ADP
M
5292 27ADENOSINE-5'-DIPHOSPHATE
lig 29
MG
N
6291 1MAGNESIUM ION
lig 30
SF4
N
5290 8IRON/SULFUR CLUSTER
lig 31
ADP
N
6292 27ADENOSINE-5'-DIPHOSPHATE
lig 32
MG
O
7291 1MAGNESIUM ION
lig 33
ADP
O
7292 27ADENOSINE-5'-DIPHOSPHATE
lig 34
MG
P
8291 1MAGNESIUM ION
lig 35
SF4
P
7290 8IRON/SULFUR CLUSTER
lig 36
ADP
P
8292 27ADENOSINE-5'-DIPHOSPHATE