Analysis of Ligand-Protein Contacts in PDB entry:
2APH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 2APH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GMA
C
885 94-AMIDO-4-CARBAMOYL-BUTYRIC ACID
lig 2
DAL
C
887 5D-ALANINE
lig 3
DAL
C
888 5D-ALANINE
lig 4
NH2
C
889 1AMINO GROUP
lig 5
GMA
D
996 94-AMIDO-4-CARBAMOYL-BUTYRIC ACID
lig 6
DAL
D
998 5D-ALANINE
lig 7
DAL
D
999 5D-ALANINE
lig 8
NH2
D
1000 1AMINO GROUP
lig 9
SO4
A
900 5SULFATE ION
lig 10
SO4
B
901 5SULFATE ION
lig 11
AMU
C
901 19N-ACETYL-BETA-MURAMIC ACID
lig 12
AMU
D
1101 19N-ACETYL-BETA-MURAMIC ACID