Analysis of Ligand-Protein Contacts in PDB entry:
2CHB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 2CHB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAL
A
1 11BETA-D-GALACTOPYRANOSE
lig 2
NGA
A
2 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 3
GAL
A
3 11BETA-D-GALACTOPYRANOSE
lig 4
SIA
A
4 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 5
BGC
B
1 12BETA-D-GLUCOPYRANOSE
lig 6
GAL
B
2 11BETA-D-GALACTOPYRANOSE
lig 7
NGA
B
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 8
GAL
B
4 11BETA-D-GALACTOPYRANOSE
lig 9
SIA
B
5 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
GAL
C
1 11BETA-D-GALACTOPYRANOSE
lig 11
NGA
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 12
GAL
C
3 11BETA-D-GALACTOPYRANOSE
lig 13
SIA
C
4 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 14
BGC
I
1 12BETA-D-GLUCOPYRANOSE
lig 15
GAL
I
2 11BETA-D-GALACTOPYRANOSE
lig 16
NGA
I
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 17
GAL
I
4 11BETA-D-GALACTOPYRANOSE
lig 18
SIA
I
5 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 19
BGC
J
1 12BETA-D-GLUCOPYRANOSE
lig 20
GAL
J
2 11BETA-D-GALACTOPYRANOSE
lig 21
NGA
J
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 22
GAL
J
4 11BETA-D-GALACTOPYRANOSE
lig 23
SIA
J
5 20N-ACETYL-ALPHA-NEURAMINIC ACID