Analysis of Ligand-Protein Contacts in PDB entry:
2DKB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 4 ligands in PDB entry 2DKB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
A
435 1SODIUM ION
lig 2
NA
A
436 1SODIUM ION
lig 3
PLP
A
437 15PYRIDOXAL-5'-PHOSPHATE
lig 4
MES
A
434 122-(N-MORPHOLINO)-ETHANESULFONIC ACID