Analysis of Ligand-Protein Contacts in PDB entry:
2DU1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 2DU1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 3
NAG
E
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
F
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
FUC
G
2 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
G
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
FUC
H
2 10ALPHA-L-FUCOPYRANOSE
lig 12
NAG
H
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
MGC
A
1401 16METHYL 2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTO
lig 16
NAG
A
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
CA
A
1303 1CALCIUM ION
lig 18
MN
A
1300 1MANGANESE (II) ION
lig 19
MGC
B
2401 16METHYL 2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTO
lig 20
CA
B
2303 1CALCIUM ION
lig 21
MN
B
2300 1MANGANESE (II) ION
lig 22
MGC
C
3401 16METHYL 2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTO
lig 23
NAG
C
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
CA
C
3303 1CALCIUM ION
lig 25
MN
C
3300 1MANGANESE (II) ION
lig 26
MGC
D
4401 16METHYL 2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTO
lig 27
NAG
D
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
CA
D
4303 1CALCIUM ION
lig 29
MN
D
4300 1MANGANESE (II) ION