Analysis of Ligand-Protein Contacts in PDB entry:
2DWJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 2DWJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FRU
B
1 12BETA-D-FRUCTOFURANOSE
lig 2
GLC
B
2 11ALPHA-D-GLUCOPYRANOSE
lig 3
GAL
B
3 11BETA-D-GALACTOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 10
BMA
D
4 11BETA-D-MANNOPYRANOSE
lig 11
NAG
A
1001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
ZN
A
1101 1ZINC ION
lig 13
ZN
A
1102 1ZINC ION
lig 14
FE
A
1687 1FE (III) ION
lig 15
CO3
A
1999 4CARBONATE ION
lig 16
SO4
A
2000 5SULFATE ION