Analysis of Ligand-Protein Contacts in PDB entry:
2DZ5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 256 ligands in PDB entry 2DZ5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GLU
A
103 9GLUTAMIC ACID
lig 2
PRO
A
104 7PROLINE
lig 3
ALA
A
105 5ALANINE
lig 4
MET
A
106 8METHIONINE
lig 5
ILE
A
107 8ISOLEUCINE
lig 6
ALA
A
108 5ALANINE
lig 7
GLU
A
109 9GLUTAMIC ACID
lig 8
CYS
A
110 6CYSTEINE
lig 9
LYS
A
111 9LYSINE
lig 10
THR
A
112 7THREONINE
lig 11
ARG
A
113 11ARGININE
lig 12
THR
A
114 7THREONINE
lig 13
GLU
A
115 9GLUTAMIC ACID
lig 14
VAL
A
116 7VALINE
lig 15
PHE
A
117 11PHENYLALANINE
lig 16
GLU
A
118 9GLUTAMIC ACID
lig 17
ILE
A
119 8ISOLEUCINE
lig 18
SER
A
120 6SERINE
lig 19
ARG
A
121 11ARGININE
lig 20
PHE
A
122 11PHENYLALANINE
lig 21
LEU
A
123 8LEUCINE
lig 22
VAL
A
124 7VALINE
lig 23
TRP
A
125 14TRYPTOPHAN
lig 24
PRO
A
126 7PROLINE
lig 25
PRO
A
127 7PROLINE
lig 26
CYS
A
128 6CYSTEINE
lig 27
VAL
A
129 7VALINE
lig 28
GLU
A
130 9GLUTAMIC ACID
lig 29
VAL
A
131 7VALINE
lig 30
GLN
A
132 9GLUTAMINE
lig 31
ARG
A
133 11ARGININE
lig 32
CYS
A
134 6CYSTEINE
lig 33
SER
A
135 6SERINE
lig 34
GLY
A
136 4GLYCINE
lig 35
CYS
A
137 6CYSTEINE
lig 36
CYS
A
138 6CYSTEINE
lig 37
ASN
A
139 8ASPARAGINE
lig 38
ASN
A
140 8ASPARAGINE
lig 39
ARG
A
141 11ARGININE
lig 40
ASN
A
142 8ASPARAGINE
lig 41
VAL
A
143 7VALINE
lig 42
GLN
A
144 9GLUTAMINE
lig 43
CYS
A
145 6CYSTEINE
lig 44
ARG
A
146 11ARGININE
lig 45
PRO
A
147 7PROLINE
lig 46
THR
A
148 7THREONINE
lig 47
GLN
A
149 9GLUTAMINE
lig 48
VAL
A
150 7VALINE
lig 49
GLN
A
151 9GLUTAMINE
lig 50
LEU
A
152 8LEUCINE
lig 51
ARG
A
153 11ARGININE
lig 52
PRO
A
154 7PROLINE
lig 53
VAL
A
155 7VALINE
lig 54
GLN
A
156 9GLUTAMINE
lig 55
VAL
A
157 7VALINE
lig 56
ARG
A
158 11ARGININE
lig 57
LYS
A
159 9LYSINE
lig 58
ILE
A
160 8ISOLEUCINE
lig 59
GLU
A
161 9GLUTAMIC ACID
lig 60
ILE
A
162 8ISOLEUCINE
lig 61
VAL
A
163 7VALINE
lig 62
ARG
A
164 11ARGININE
lig 63
LYS
A
165 9LYSINE
lig 64
LYS
A
166 9LYSINE
lig 65
PRO
A
167 7PROLINE
lig 66
ILE
A
168 8ISOLEUCINE
lig 67
PHE
A
169 11PHENYLALANINE
lig 68
LYS
A
170 9LYSINE
lig 69
LYS
A
171 9LYSINE
lig 70
ALA
A
172 5ALANINE
lig 71
THR
A
173 7THREONINE
lig 72
VAL
A
174 7VALINE
lig 73
THR
A
175 7THREONINE
lig 74
LEU
A
176 8LEUCINE
lig 75
GLU
A
177 9GLUTAMIC ACID
lig 76
ASP
A
178 8ASPARTIC ACID
lig 77
HIS
A
179 10HISTIDINE
lig 78
LEU
A
180 8LEUCINE
lig 79
ALA
A
181 5ALANINE
lig 80
CYS
A
182 6CYSTEINE
lig 81
LYS
A
183 9LYSINE
lig 82
CYS
A
184 6CYSTEINE
lig 83
GLU
A
185 9GLUTAMIC ACID
lig 84
THR
A
186 7THREONINE
lig 85
VAL
A
187 7VALINE
lig 86
ALA
A
188 5ALANINE
lig 87
ALA
A
189 5ALANINE
lig 88
ILE
A
190 8ISOLEUCINE
lig 89
ALA
A
191 5ALANINE
lig 90
GLU
A
192 9GLUTAMIC ACID
lig 91
PRO
A
193 7PROLINE
lig 92
ALA
A
194 5ALANINE
lig 93
MET
A
195 8METHIONINE
lig 94
ILE
A
196 8ISOLEUCINE
lig 95
ALA
A
197 5ALANINE
lig 96
GLU
A
198 9GLUTAMIC ACID
lig 97
CYS
A
199 6CYSTEINE
lig 98
LYS
A
200 9LYSINE
lig 99
THR
A
201 7THREONINE
lig 100
ARG
A
202 11ARGININE
lig 101
THR
A
203 7THREONINE
lig 102
GLU
A
204 9GLUTAMIC ACID
lig 103
VAL
A
205 7VALINE
lig 104
PHE
A
206 11PHENYLALANINE
lig 105
GLU
A
207 9GLUTAMIC ACID
lig 106
ILE
A
208 8ISOLEUCINE
lig 107
SER
A
209 6SERINE
lig 108
PHE
A
210 11PHENYLALANINE
lig 109
LEU
A
211 8LEUCINE
lig 110
VAL
A
212 7VALINE
lig 111
TRP
A
213 14TRYPTOPHAN
lig 112
PRO
A
214 7PROLINE
lig 113
PRO
A
215 7PROLINE
lig 114
CYS
A
216 6CYSTEINE
lig 115
VAL
A
217 7VALINE
lig 116
GLU
A
218 9GLUTAMIC ACID
lig 117
VAL
A
219 7VALINE
lig 118
GLN
A
220 9GLUTAMINE
lig 119
ARG
A
221 11ARGININE
lig 120
CYS
A
222 6CYSTEINE
lig 121
SER
A
223 6SERINE
lig 122
GLY
A
224 4GLYCINE
lig 123
CYS
A
225 6CYSTEINE
lig 124
CYS
A
226 6CYSTEINE
lig 125
ASN
A
227 8ASPARAGINE
lig 126
ASN
A
228 8ASPARAGINE
lig 127
ARG
A
229 11ARGININE
lig 128
ASN
A
230 8ASPARAGINE
lig 129
VAL
A
231 7VALINE
lig 130
GLN
A
232 9GLUTAMINE
lig 131
CYS
A
233 6CYSTEINE
lig 132
ARG
A
234 11ARGININE
lig 133
PRO
A
235 7PROLINE
lig 134
THR
A
236 7THREONINE
lig 135
GLN
A
237 9GLUTAMINE
lig 136
VAL
A
238 7VALINE
lig 137
GLN
A
239 9GLUTAMINE
lig 138
LEU
A
240 8LEUCINE
lig 139
ARG
A
241 11ARGININE
lig 140
PRO
A
242 7PROLINE
lig 141
VAL
A
243 7VALINE
lig 142
GLN
A
244 9GLUTAMINE
lig 143
VAL
A
245 7VALINE
lig 144
ARG
A
246 11ARGININE
lig 145
LYS
A
247 9LYSINE
lig 146
ILE
A
248 8ISOLEUCINE
lig 147
GLU
A
249 9GLUTAMIC ACID
lig 148
ILE
A
250 8ISOLEUCINE
lig 149
VAL
A
251 7VALINE
lig 150
ARG
A
252 11ARGININE
lig 151
LYS
A
253 9LYSINE
lig 152
LYS
A
254 9LYSINE
lig 153
PRO
A
255 7PROLINE
lig 154
ILE
A
256 8ISOLEUCINE
lig 155
PHE
A
257 11PHENYLALANINE
lig 156
LYS
A
258 9LYSINE
lig 157
LYS
A
259 9LYSINE
lig 158
ALA
A
260 5ALANINE
lig 159
THR
A
261 7THREONINE
lig 160
VAL
A
262 7VALINE
lig 161
THR
A
263 7THREONINE
lig 162
LEU
A
264 8LEUCINE
lig 163
GLU
A
265 9GLUTAMIC ACID
lig 164
ASP
A
266 8ASPARTIC ACID
lig 165
HIS
A
267 10HISTIDINE
lig 166
LEU
A
268 8LEUCINE
lig 167
ALA
A
269 5ALANINE
lig 168
CYS
A
270 6CYSTEINE
lig 169
LYS
A
271 9LYSINE
lig 170
CYS
A
272 6CYSTEINE
lig 171
GLU
A
273 9GLUTAMIC ACID
lig 172
THR
A
274 7THREONINE
lig 173
VAL
A
275 7VALINE
lig 174
ILE
A
276 8ISOLEUCINE
lig 175
ALA
A
277 5ALANINE
lig 176
GLU
A
278 9GLUTAMIC ACID
lig 177
PRO
A
279 7PROLINE
lig 178
ALA
A
280 5ALANINE
lig 179
MET
A
281 8METHIONINE
lig 180
ILE
A
282 8ISOLEUCINE
lig 181
ALA
A
283 5ALANINE
lig 182
GLU
A
284 9GLUTAMIC ACID
lig 183
CYS
A
285 6CYSTEINE
lig 184
LYS
A
286 9LYSINE
lig 185
THR
A
287 7THREONINE
lig 186
ARG
A
288 11ARGININE
lig 187
THR
A
289 7THREONINE
lig 188
GLU
A
290 9GLUTAMIC ACID
lig 189
VAL
A
291 7VALINE
lig 190
PHE
A
292 11PHENYLALANINE
lig 191
GLU
A
293 9GLUTAMIC ACID
lig 192
ILE
A
294 8ISOLEUCINE
lig 193
SER
A
295 6SERINE
lig 194
LEU
A
296 8LEUCINE
lig 195
VAL
A
297 7VALINE
lig 196
TRP
A
298 14TRYPTOPHAN
lig 197
PRO
A
299 7PROLINE
lig 198
PRO
A
300 7PROLINE
lig 199
CYS
A
301 6CYSTEINE
lig 200
VAL
A
302 7VALINE
lig 201
GLU
A
303 9GLUTAMIC ACID
lig 202
VAL
A
304 7VALINE
lig 203
GLN
A
305 9GLUTAMINE
lig 204
ARG
A
306 11ARGININE
lig 205
CYS
A
307 6CYSTEINE
lig 206
SER
A
308 6SERINE
lig 207
GLY
A
309 4GLYCINE
lig 208
CYS
A
310 6CYSTEINE
lig 209
CYS
A
311 6CYSTEINE
lig 210
ASN
A
312 8ASPARAGINE
lig 211
ASN
A
313 8ASPARAGINE
lig 212
ARG
A
314 11ARGININE
lig 213
ASN
A
315 8ASPARAGINE
lig 214
VAL
A
316 7VALINE
lig 215
GLN
A
317 9GLUTAMINE
lig 216
CYS
A
318 6CYSTEINE
lig 217
ARG
A
319 11ARGININE
lig 218
PRO
A
320 7PROLINE
lig 219
THR
A
321 7THREONINE
lig 220
GLN
A
322 9GLUTAMINE
lig 221
VAL
A
323 7VALINE
lig 222
GLN
A
324 9GLUTAMINE
lig 223
LEU
A
325 8LEUCINE
lig 224
ARG
A
326 11ARGININE
lig 225
PRO
A
327 7PROLINE
lig 226
VAL
A
328 7VALINE
lig 227
GLN
A
329 9GLUTAMINE
lig 228
VAL
A
330 7VALINE
lig 229
ARG
A
331 11ARGININE
lig 230
LYS
A
332 9LYSINE
lig 231
ILE
A
333 8ISOLEUCINE
lig 232
GLU
A
334 9GLUTAMIC ACID
lig 233
ILE
A
335 8ISOLEUCINE
lig 234
VAL
A
336 7VALINE
lig 235
ARG
A
337 11ARGININE
lig 236
LYS
A
338 9LYSINE
lig 237
LYS
A
339 9LYSINE
lig 238
PRO
A
340 7PROLINE
lig 239
ILE
A
341 8ISOLEUCINE
lig 240
PHE
A
342 11PHENYLALANINE
lig 241
LYS
A
343 9LYSINE
lig 242
LYS
A
344 9LYSINE
lig 243
ALA
A
345 5ALANINE
lig 244
THR
A
346 7THREONINE
lig 245
VAL
A
347 7VALINE
lig 246
THR
A
348 7THREONINE
lig 247
LEU
A
349 8LEUCINE
lig 248
GLU
A
350 9GLUTAMIC ACID
lig 249
ASP
A
351 8ASPARTIC ACID
lig 250
HIS
A
352 10HISTIDINE
lig 251
LEU
A
353 8LEUCINE
lig 252
ALA
A
354 5ALANINE
lig 253
CYS
A
355 6CYSTEINE
lig 254
LYS
A
356 9LYSINE
lig 255
CYS
A
357 6CYSTEINE
lig 256
GLU
A
358 9GLUTAMIC ACID