Analysis of Ligand-Protein Contacts in PDB entry:
2EF6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 2EF6. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MMA
E
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 2
MAN
E
2 11ALPHA-D-MANNOPYRANOSE
lig 3
MMA
F
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 4
MAN
F
2 11ALPHA-D-MANNOPYRANOSE
lig 5
MMA
G
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 6
MAN
G
2 11ALPHA-D-MANNOPYRANOSE
lig 7
MMA
H
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 8
MAN
H
2 11ALPHA-D-MANNOPYRANOSE
lig 9
CA
A
238 1CALCIUM ION
lig 10
MN
A
239 1MANGANESE (II) ION
lig 11
CA
B
238 1CALCIUM ION
lig 12
MN
B
239 1MANGANESE (II) ION
lig 13
CA
C
238 1CALCIUM ION
lig 14
MN
C
239 1MANGANESE (II) ION
lig 15
CA
D
238 1CALCIUM ION
lig 16
MN
D
239 1MANGANESE (II) ION