Analysis of Ligand-Protein Contacts in PDB entry:
2EIK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 66 ligands in PDB entry 2EIK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
FME
B
1 10N-FORMYLMETHIONINE
lig 3
TPO
G
11 11PHOSPHOTHREONINE
lig 4
SAC
I
1 9N-ACETYL-SERINE
lig 5
FME
N
1 10N-FORMYLMETHIONINE
lig 6
FME
O
1 10N-FORMYLMETHIONINE
lig 7
TPO
T
11 11PHOSPHOTHREONINE
lig 8
SAC
V
1 9N-ACETYL-SERINE
lig 9
CU
A
517 1COPPER (II) ION
lig 10
MG
A
518 1MAGNESIUM ION
lig 11
NA
A
519 1SODIUM ION
lig 12
CD
A
603 1CADMIUM ION
lig 13
HEA
A
515 60HEME-A
lig 14
HEA
A
516 60HEME-A
lig 15
TGL
A
521 63TRISTEAROYLGLYCEROL
lig 16
TGL
A
523 63TRISTEAROYLGLYCEROL
lig 17
PGV
A
524 51 OCTADEC-11-ENOATE
lig 18
PGV
A
604 51 OCTADEC-11-ENOATE
lig 19
CUA
B
228 2DINUCLEAR COPPER ION
lig 20
PSC
B
230 52 17,20-DIEN-1-AMINIUM 4-OXIDE
lig 21
CHD
B
1086 29CHOLIC ACID
lig 22
DMU
C
272 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 23
CD
C
262 1CADMIUM ION
lig 24
CHD
C
525 29CHOLIC ACID
lig 25
PEK
C
264 53 11,14-TETRAENOATE
lig 26
PEK
C
265 53 11,14-TETRAENOATE
lig 27
PGV
C
267 51 OCTADEC-11-ENOATE
lig 28
PGV
C
268 51 OCTADEC-11-ENOATE
lig 29
CDL
C
270 100CARDIOLIPIN
lig 30
CHD
C
271 29CHOLIC ACID
lig 31
CD
E
606 1CADMIUM ION
lig 32
ZN
F
99 1ZINC ION
lig 33
CDL
G
269 100CARDIOLIPIN
lig 34
PEK
G
1263 53 11,14-TETRAENOATE
lig 35
CHD
J
60 29CHOLIC ACID
lig 36
TGL
L
522 63TRISTEAROYLGLYCEROL
lig 37
DMU
M
526 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 38
CU
N
517 1COPPER (II) ION
lig 39
MG
N
1518 1MAGNESIUM ION
lig 40
NA
N
1519 1SODIUM ION
lig 41
CD
N
1603 1CADMIUM ION
lig 42
HEA
N
515 60HEME-A
lig 43
HEA
N
516 60HEME-A
lig 44
TGL
N
1521 63TRISTEAROYLGLYCEROL
lig 45
PGV
N
1524 51 OCTADEC-11-ENOATE
lig 46
PGV
N
1266 51 OCTADEC-11-ENOATE
lig 47
CUA
O
228 2DINUCLEAR COPPER ION
lig 48
CHD
O
229 29CHOLIC ACID
lig 49
PSC
O
1230 52 17,20-DIEN-1-AMINIUM 4-OXIDE
lig 50
DMU
P
1272 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 51
CD
P
1262 1CADMIUM ION
lig 52
CD
P
1609 1CADMIUM ION
lig 53
CHD
P
1525 29CHOLIC ACID
lig 54
PEK
P
1264 53 11,14-TETRAENOATE
lig 55
PEK
P
1265 53 11,14-TETRAENOATE
lig 56
PGV
P
1267 51 OCTADEC-11-ENOATE
lig 57
PGV
P
1268 51 OCTADEC-11-ENOATE
lig 58
CDL
P
1270 100CARDIOLIPIN
lig 59
CHD
P
1271 29CHOLIC ACID
lig 60
TGL
Q
1523 63TRISTEAROYLGLYCEROL
lig 61
ZN
S
99 1ZINC ION
lig 62
PEK
T
263 53 11,14-TETRAENOATE
lig 63
CDL
T
1269 100CARDIOLIPIN
lig 64
CHD
W
1060 29CHOLIC ACID
lig 65
TGL
Y
1522 63TRISTEAROYLGLYCEROL
lig 66
DMU
Z
1526 33DECYL-BETA-D-MALTOPYRANOSIDE