Analysis of Ligand-Protein Contacts in PDB entry:
2EIM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 64 ligands in PDB entry 2EIM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
FME
B
1 10N-FORMYLMETHIONINE
lig 3
TPO
G
11 11PHOSPHOTHREONINE
lig 4
SAC
I
1 9N-ACETYL-SERINE
lig 5
FME
N
1 10N-FORMYLMETHIONINE
lig 6
FME
O
1 10N-FORMYLMETHIONINE
lig 7
TPO
T
11 11PHOSPHOTHREONINE
lig 8
SAC
V
1 9N-ACETYL-SERINE
lig 9
CU
A
517 1COPPER (II) ION
lig 10
MG
A
518 1MAGNESIUM ION
lig 11
NA
A
519 1SODIUM ION
lig 12
ZN
A
603 1ZINC ION
lig 13
HEA
A
515 60HEME-A
lig 14
HEA
A
516 60HEME-A
lig 15
PGV
A
524 51 OCTADEC-11-ENOATE
lig 16
CHD
A
525 29CHOLIC ACID
lig 17
CUA
B
228 2DINUCLEAR COPPER ION
lig 18
TGL
B
521 63TRISTEAROYLGLYCEROL
lig 19
PSC
B
230 52 17,20-DIEN-1-AMINIUM 4-OXIDE
lig 20
CHD
B
1086 29CHOLIC ACID
lig 21
DMU
C
272 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 22
ZN
C
262 1ZINC ION
lig 23
PEK
C
264 53 11,14-TETRAENOATE
lig 24
PEK
C
265 53 11,14-TETRAENOATE
lig 25
PGV
C
266 51 OCTADEC-11-ENOATE
lig 26
PGV
C
267 51 OCTADEC-11-ENOATE
lig 27
PGV
C
268 51 OCTADEC-11-ENOATE
lig 28
CDL
C
270 100CARDIOLIPIN
lig 29
CHD
C
271 29CHOLIC ACID
lig 30
TGL
D
523 63TRISTEAROYLGLYCEROL
lig 31
ZN
F
99 1ZINC ION
lig 32
CDL
G
269 100CARDIOLIPIN
lig 33
PEK
G
1263 53 11,14-TETRAENOATE
lig 34
CHD
J
60 29CHOLIC ACID
lig 35
TGL
L
522 63TRISTEAROYLGLYCEROL
lig 36
DMU
M
526 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 37
CU
N
517 1COPPER (II) ION
lig 38
MG
N
1518 1MAGNESIUM ION
lig 39
NA
N
1519 1SODIUM ION
lig 40
ZN
N
1603 1ZINC ION
lig 41
HEA
N
515 60HEME-A
lig 42
HEA
N
516 60HEME-A
lig 43
CHD
N
1604 29CHOLIC ACID
lig 44
TGL
N
1522 63TRISTEAROYLGLYCEROL
lig 45
TGL
N
1523 63TRISTEAROYLGLYCEROL
lig 46
PGV
N
1524 51 OCTADEC-11-ENOATE
lig 47
CUA
O
228 2DINUCLEAR COPPER ION
lig 48
TGL
O
1521 63TRISTEAROYLGLYCEROL
lig 49
PSC
O
1230 52 17,20-DIEN-1-AMINIUM 4-OXIDE
lig 50
DMU
P
1272 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 51
ZN
P
1262 1ZINC ION
lig 52
CHD
P
1525 29CHOLIC ACID
lig 53
PEK
P
1264 53 11,14-TETRAENOATE
lig 54
PEK
P
1265 53 11,14-TETRAENOATE
lig 55
PGV
P
1266 51 OCTADEC-11-ENOATE
lig 56
PGV
P
1267 51 OCTADEC-11-ENOATE
lig 57
PGV
P
1268 51 OCTADEC-11-ENOATE
lig 58
CDL
P
1270 100CARDIOLIPIN
lig 59
ZN
S
99 1ZINC ION
lig 60
PEK
T
263 53 11,14-TETRAENOATE
lig 61
CDL
T
1269 100CARDIOLIPIN
lig 62
CHD
W
1271 29CHOLIC ACID
lig 63
CHD
W
1060 29CHOLIC ACID
lig 64
DMU
Z
1526 33DECYL-BETA-D-MALTOPYRANOSIDE