Analysis of Ligand-Protein Contacts in PDB entry:
2GK1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 35 ligands in PDB entry 2GK1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 7
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
Y
3 11BETA-D-MANNOPYRANOSE
lig 15
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
d
3 11BETA-D-MANNOPYRANOSE
lig 26
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NGT
A
21 14 TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-
lig 29
NGT
B
22 14 TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-
lig 30
NGT
C
530 14 TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-
lig 31
NGT
D
24 14 TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-
lig 32
NGT
E
530 14 TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-
lig 33
NGT
F
26 14 TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-
lig 34
NGT
G
533 14 TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-
lig 35
NGT
H
28 14 TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-