Analysis of Ligand-Protein Contacts in PDB entry:
2HNJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 268 ligands in PDB entry 2HNJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4

132 5SULFATE ION
lig 2
SER
A
2 6SERINE
lig 3
ASP
A
3 8ASPARTIC ACID
lig 4
ASP
A
4 8ASPARTIC ACID
lig 5
PHE
A
5 11PHENYLALANINE
lig 6
LEU
A
6 8LEUCINE
lig 7
TRP
A
7 14TRYPTOPHAN
lig 8
PHE
A
8 11PHENYLALANINE
lig 9
GLU
A
9 9GLUTAMIC ACID
lig 10
GLY
A
10 4GLYCINE
lig 11
ILE
A
11 8ISOLEUCINE
lig 12
ALA
A
12 5ALANINE
lig 13
PHE
A
13 11PHENYLALANINE
lig 14
PRO
A
14 7PROLINE
lig 15
THR
A
15 7THREONINE
lig 16
MET
A
16 8METHIONINE
lig 17
GLY
A
17 4GLYCINE
lig 18
PHE
A
18 11PHENYLALANINE
lig 19
ARG
A
19 11ARGININE
lig 20
SER
A
20 6SERINE
lig 21
GLU
A
21 9GLUTAMIC ACID
lig 22
THR
A
22 7THREONINE
lig 23
LEU
A
23 8LEUCINE
lig 24
ARG
A
24 11ARGININE
lig 25
LYS
A
25 9LYSINE
lig 26
VAL
A
26 7VALINE
lig 27
ARG
A
27 11ARGININE
lig 28
ASP
A
28 8ASPARTIC ACID
lig 29
GLU
A
29 9GLUTAMIC ACID
lig 30
PHE
A
30 11PHENYLALANINE
lig 31
VAL
A
31 7VALINE
lig 32
ILE
A
32 8ISOLEUCINE
lig 33
ARG
A
33 11ARGININE
lig 34
ASP
A
34 8ASPARTIC ACID
lig 35
GLU
A
35 9GLUTAMIC ACID
lig 36
ASP
A
36 8ASPARTIC ACID
lig 37
VAL
A
37 7VALINE
lig 38
ILE
A
38 8ISOLEUCINE
lig 39
ILE
A
39 8ISOLEUCINE
lig 40
LEU
A
40 8LEUCINE
lig 41
THR
A
41 7THREONINE
lig 42
TYR
A
42 12TYROSINE
lig 43
PRO
A
43 7PROLINE
lig 44
LYS
A
44 9LYSINE
lig 45
SER
A
45 6SERINE
lig 46
GLY
A
46 4GLYCINE
lig 47
THR
A
47 7THREONINE
lig 48
ASN
A
48 8ASPARAGINE
lig 49
TRP
A
49 14TRYPTOPHAN
lig 50
LEU
A
50 8LEUCINE
lig 51
ALA
A
51 5ALANINE
lig 52
GLU
A
52 9GLUTAMIC ACID
lig 53
ILE
A
53 8ISOLEUCINE
lig 54
LEU
A
54 8LEUCINE
lig 55
CYS
A
55 6CYSTEINE
lig 56
LEU
A
56 8LEUCINE
lig 57
MET
A
57 8METHIONINE
lig 58
HIS
A
58 10HISTIDINE
lig 59
SER
A
59 6SERINE
lig 60
LYS
A
60 9LYSINE
lig 61
GLY
A
61 4GLYCINE
lig 62
ASP
A
62 8ASPARTIC ACID
lig 63
ALA
A
63 5ALANINE
lig 64
LYS
A
64 9LYSINE
lig 65
TRP
A
65 14TRYPTOPHAN
lig 66
ILE
A
66 8ISOLEUCINE
lig 67
GLN
A
67 9GLUTAMINE
lig 68
SER
A
68 6SERINE
lig 69
VAL
A
69 7VALINE
lig 70
PRO
A
70 7PROLINE
lig 71
ILE
A
71 8ISOLEUCINE
lig 72
TRP
A
72 14TRYPTOPHAN
lig 73
GLU
A
73 9GLUTAMIC ACID
lig 74
ARG
A
74 11ARGININE
lig 75
SER
A
75 6SERINE
lig 76
PRO
A
76 7PROLINE
lig 77
TRP
A
77 14TRYPTOPHAN
lig 78
VAL
A
78 7VALINE
lig 79
GLU
A
79 9GLUTAMIC ACID
lig 80
SER
A
80 6SERINE
lig 81
GLU
A
81 9GLUTAMIC ACID
lig 82
ILE
A
82 8ISOLEUCINE
lig 83
GLY
A
83 4GLYCINE
lig 84
TYR
A
84 12TYROSINE
lig 85
THR
A
85 7THREONINE
lig 86
ALA
A
86 5ALANINE
lig 87
LEU
A
87 8LEUCINE
lig 88
SER
A
88 6SERINE
lig 89
GLU
A
89 9GLUTAMIC ACID
lig 90
THR
A
90 7THREONINE
lig 91
GLU
A
91 9GLUTAMIC ACID
lig 92
SER
A
92 6SERINE
lig 93
PRO
A
93 7PROLINE
lig 94
ARG
A
94 11ARGININE
lig 95
LEU
A
95 8LEUCINE
lig 96
PHE
A
96 11PHENYLALANINE
lig 97
SER
A
97 6SERINE
lig 98
SER
A
98 6SERINE
lig 99
HIS
A
99 10HISTIDINE
lig 100
LEU
A
100 8LEUCINE
lig 101
PRO
A
101 7PROLINE
lig 102
ILE
A
102 8ISOLEUCINE
lig 103
GLN
A
103 9GLUTAMINE
lig 104
LEU
A
104 8LEUCINE
lig 105
PHE
A
105 11PHENYLALANINE
lig 106
PRO
A
106 7PROLINE
lig 107
LYS
A
107 9LYSINE
lig 108
SER
A
108 6SERINE
lig 109
PHE
A
109 11PHENYLALANINE
lig 110
PHE
A
110 11PHENYLALANINE
lig 111
SER
A
111 6SERINE
lig 112
SER
A
112 6SERINE
lig 113
LYS
A
113 9LYSINE
lig 114
ALA
A
114 5ALANINE
lig 115
LYS
A
115 9LYSINE
lig 116
VAL
A
116 7VALINE
lig 117
ILE
A
117 8ISOLEUCINE
lig 118
TYR
A
118 12TYROSINE
lig 119
LEU
A
119 8LEUCINE
lig 120
MET
A
120 8METHIONINE
lig 121
ARG
A
121 11ARGININE
lig 122
ASN
A
122 8ASPARAGINE
lig 123
PRO
A
123 7PROLINE
lig 124
ARG
A
124 11ARGININE
lig 125
ASP
A
125 8ASPARTIC ACID
lig 126
VAL
A
126 7VALINE
lig 127
LEU
A
127 8LEUCINE
lig 128
VAL
A
128 7VALINE
lig 129
SER
A
129 6SERINE
lig 130
GLY
A
130 4GLYCINE
lig 131
TYR
A
131 12TYROSINE
lig 132
PHE
A
132 11PHENYLALANINE
lig 133
PHE
A
133 11PHENYLALANINE
lig 134
TRP
A
134 14TRYPTOPHAN
lig 135
LYS
A
135 9LYSINE
lig 136
ASN
A
136 8ASPARAGINE
lig 137
MET
A
137 8METHIONINE
lig 138
LYS
A
138 9LYSINE
lig 139
PHE
A
139 11PHENYLALANINE
lig 140
ILE
A
140 8ISOLEUCINE
lig 141
LYS
A
141 9LYSINE
lig 142
LYS
A
142 9LYSINE
lig 143
PRO
A
143 7PROLINE
lig 144
LYS
A
144 9LYSINE
lig 145
SER
A
145 6SERINE
lig 146
TRP
A
146 14TRYPTOPHAN
lig 147
GLU
A
147 9GLUTAMIC ACID
lig 148
GLU
A
148 9GLUTAMIC ACID
lig 149
TYR
A
149 12TYROSINE
lig 150
PHE
A
150 11PHENYLALANINE
lig 151
GLU
A
151 9GLUTAMIC ACID
lig 152
TRP
A
152 14TRYPTOPHAN
lig 153
PHE
A
153 11PHENYLALANINE
lig 154
CYS
A
154 6CYSTEINE
lig 155
GLN
A
155 9GLUTAMINE
lig 156
GLY
A
156 4GLYCINE
lig 157
THR
A
157 7THREONINE
lig 158
VAL
A
158 7VALINE
lig 159
LEU
A
159 8LEUCINE
lig 160
TYR
A
160 12TYROSINE
lig 161
GLY
A
161 4GLYCINE
lig 162
SER
A
162 6SERINE
lig 163
TRP
A
163 14TRYPTOPHAN
lig 164
PHE
A
164 11PHENYLALANINE
lig 165
ASP
A
165 8ASPARTIC ACID
lig 166
HIS
A
166 10HISTIDINE
lig 167
ILE
A
167 8ISOLEUCINE
lig 168
HIS
A
168 10HISTIDINE
lig 169
GLY
A
169 4GLYCINE
lig 170
TRP
A
170 14TRYPTOPHAN
lig 171
MET
A
171 8METHIONINE
lig 172
PRO
A
172 7PROLINE
lig 173
MET
A
173 8METHIONINE
lig 174
ARG
A
174 11ARGININE
lig 175
GLU
A
175 9GLUTAMIC ACID
lig 176
GLU
A
176 9GLUTAMIC ACID
lig 177
LYS
A
177 9LYSINE
lig 178
ASN
A
178 8ASPARAGINE
lig 179
PHE
A
179 11PHENYLALANINE
lig 180
LEU
A
180 8LEUCINE
lig 181
LEU
A
181 8LEUCINE
lig 182
LEU
A
182 8LEUCINE
lig 183
SER
A
183 6SERINE
lig 184
TYR
A
184 12TYROSINE
lig 185
GLU
A
185 9GLUTAMIC ACID
lig 186
GLU
A
186 9GLUTAMIC ACID
lig 187
LEU
A
187 8LEUCINE
lig 188
LYS
A
188 9LYSINE
lig 189
GLN
A
189 9GLUTAMINE
lig 190
ASP
A
190 8ASPARTIC ACID
lig 191
THR
A
191 7THREONINE
lig 192
GLY
A
192 4GLYCINE
lig 193
ARG
A
193 11ARGININE
lig 194
THR
A
194 7THREONINE
lig 195
ILE
A
195 8ISOLEUCINE
lig 196
GLU
A
196 9GLUTAMIC ACID
lig 197
LYS
A
197 9LYSINE
lig 198
ILE
A
198 8ISOLEUCINE
lig 199
CYS
A
199 6CYSTEINE
lig 200
GLN
A
200 9GLUTAMINE
lig 201
PHE
A
201 11PHENYLALANINE
lig 202
LEU
A
202 8LEUCINE
lig 203
GLY
A
203 4GLYCINE
lig 204
LYS
A
204 9LYSINE
lig 205
THR
A
205 7THREONINE
lig 206
LEU
A
206 8LEUCINE
lig 207
GLU
A
207 9GLUTAMIC ACID
lig 208
PRO
A
208 7PROLINE
lig 209
GLU
A
209 9GLUTAMIC ACID
lig 210
GLU
A
210 9GLUTAMIC ACID
lig 211
LEU
A
211 8LEUCINE
lig 212
ASN
A
212 8ASPARAGINE
lig 213
LEU
A
213 8LEUCINE
lig 214
ILE
A
214 8ISOLEUCINE
lig 215
LEU
A
215 8LEUCINE
lig 216
LYS
A
216 9LYSINE
lig 217
ASN
A
217 8ASPARAGINE
lig 218
SER
A
218 6SERINE
lig 219
SER
A
219 6SERINE
lig 220
PHE
A
220 11PHENYLALANINE
lig 221
GLN
A
221 9GLUTAMINE
lig 222
SER
A
222 6SERINE
lig 223
MET
A
223 8METHIONINE
lig 224
LYS
A
224 9LYSINE
lig 225
GLU
A
225 9GLUTAMIC ACID
lig 226
TYR
A
238 12TYROSINE
lig 227
VAL
A
239 7VALINE
lig 228
VAL
A
240 7VALINE
lig 229
ASP
A
241 8ASPARTIC ACID
lig 230
LYS
A
242 9LYSINE
lig 231
THR
A
243 7THREONINE
lig 232
GLN
A
244 9GLUTAMINE
lig 233
LEU
A
245 8LEUCINE
lig 234
SER
A
251 6SERINE
lig 235
GLY
A
252 4GLYCINE
lig 236
ASP
A
253 8ASPARTIC ACID
lig 237
TRP
A
254 14TRYPTOPHAN
lig 238
LYS
A
255 9LYSINE
lig 239
ASN
A
256 8ASPARAGINE
lig 240
HIS
A
257 10HISTIDINE
lig 241
PHE
A
258 11PHENYLALANINE
lig 242
THR
A
259 7THREONINE
lig 243
VAL
A
260 7VALINE
lig 244
ALA
A
261 5ALANINE
lig 245
GLN
A
262 9GLUTAMINE
lig 246
ALA
A
263 5ALANINE
lig 247
GLU
A
264 9GLUTAMIC ACID
lig 248
ASP
A
265 8ASPARTIC ACID
lig 249
PHE
A
266 11PHENYLALANINE
lig 250
ASP
A
267 8ASPARTIC ACID
lig 251
LYS
A
268 9LYSINE
lig 252
LEU
A
269 8LEUCINE
lig 253
PHE
A
270 11PHENYLALANINE
lig 254
GLN
A
271 9GLUTAMINE
lig 255
GLU
A
272 9GLUTAMIC ACID
lig 256
LYS
A
273 9LYSINE
lig 257
MET
A
274 8METHIONINE
lig 258
ALA
A
275 5ALANINE
lig 259
ASP
A
276 8ASPARTIC ACID
lig 260
LEU
A
277 8LEUCINE
lig 261
PRO
A
278 7PROLINE
lig 262
ARG
A
279 11ARGININE
lig 263
GLU
A
280 9GLUTAMIC ACID
lig 264
LEU
A
281 8LEUCINE
lig 265
PHE
A
282 11PHENYLALANINE
lig 266
PRO
A
283 7PROLINE
lig 267
TRP
A
284 14TRYPTOPHAN
lig 268
GLU
A
285 9GLUTAMIC ACID