Analysis of Ligand-Protein Contacts in PDB entry:
2J6E


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 2J6E. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
C
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
C
6 11BETA-D-GALACTOPYRANOSE
lig 7
BMA
C
7 11BETA-D-MANNOPYRANOSE
lig 8
NAG
C
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
FUL
C
9 10BETA-L-FUCOPYRANOSE
lig 10
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
D
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
GAL
D
6 11BETA-D-GALACTOPYRANOSE
lig 16
BMA
D
7 11BETA-D-MANNOPYRANOSE
lig 17
NAG
D
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
FUL
D
9 10BETA-L-FUCOPYRANOSE
lig 19
CD
A
501 1CADMIUM ION
lig 20
ZN
A
502 1ZINC ION
lig 21
CAC
A
503 5CACODYLATE ION
lig 22
MPD
A
504 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 23
MPD
A
505 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 24
MPD
A
506 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 25
ACT
A
507 4ACETATE ION
lig 26
ACT
A
508 4ACETATE ION
lig 27
ZN
B
501 1ZINC ION
lig 28
MPD
B
502 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 29
MPD
B
503 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 30
ACT
B
504 4ACETATE ION
lig 31
ACT
H
301 4ACETATE ION
lig 32
MPD
M
301 8(4S)-2-METHYL-2,4-PENTANEDIOL