Analysis of Ligand-Protein Contacts in PDB entry:
2J8D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 2J8D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GOL
H
1261 6GLYCEROL
lig 2
GOL
H
1262 6GLYCEROL
lig 3
GOL
H
1263 6GLYCEROL
lig 4
GOL
H
1264 6GLYCEROL
lig 5
BCL
L
1282 66BACTERIOCHLOROPHYLL A
lig 6
BCL
L
1283 66BACTERIOCHLOROPHYLL A
lig 7
LDA
L
1284 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 8
LDA
L
1285 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 9
LDA
L
1286 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 10
BPH
L
1287 65BACTERIOPHEOPHYTIN A
lig 11
U10
L
1288 23UBIQUINONE-10
lig 12
PO4
L
1289 5PHOSPHATE ION
lig 13
HTO
L
1290 10HEPTANE-1,2,3-TRIOL
lig 14
HTO
L
1291 10HEPTANE-1,2,3-TRIOL
lig 15
GOL
L
1292 6GLYCEROL
lig 16
GOL
L
1293 6GLYCEROL
lig 17
GOL
L
1294 6GLYCEROL
lig 18
BCL
M
1308 66BACTERIOCHLOROPHYLL A
lig 19
BCL
M
1309 66BACTERIOCHLOROPHYLL A
lig 20
LDA
M
1310 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 21
LDA
M
1311 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 22
LDA
M
1312 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 23
LDA
M
1313 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 24
LDA
M
1314 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 25
LDA
M
1315 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 26
FE
M
1316 1FE (III) ION
lig 27
BPH
M
1317 65BACTERIOPHEOPHYTIN A
lig 28
U10
M
1318 47UBIQUINONE-10
lig 29
SPO
M
1319 42SPHEROIDENE
lig 30
CDL
M
1320 81CARDIOLIPIN