Analysis of Ligand-Protein Contacts in PDB entry:
2JDY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 2JDY. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MMA
A
1115 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 2
CA
A
1116 1CALCIUM ION
lig 3
CA
A
1117 1CALCIUM ION
lig 4
MMA
B
1115 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 5
CA
B
1116 1CALCIUM ION
lig 6
CA
B
1117 1CALCIUM ION
lig 7
MMA
C
1115 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 8
CA
C
1116 1CALCIUM ION
lig 9
CA
C
1117 1CALCIUM ION
lig 10
MMA
D
1115 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 11
CA
D
1116 1CALCIUM ION
lig 12
CA
D
1117 1CALCIUM ION