Analysis of Ligand-Protein Contacts in PDB entry:
2KMB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 2KMB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MAG
A
1 16METHYL 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYR
lig 2
GAL
A
2 11BETA-D-GALACTOPYRANOSE
lig 3
SIA
A
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 4
FUC
A
4 10ALPHA-L-FUCOPYRANOSE
lig 5
MAG
B
1 16METHYL 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYR
lig 6
GAL
B
2 11BETA-D-GALACTOPYRANOSE
lig 7
SIA
B
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 8
FUC
B
4 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
C
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
GAL
C
2 11BETA-D-GALACTOPYRANOSE
lig 11
SIA
C
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 12
FUC
C
4 10ALPHA-L-FUCOPYRANOSE
lig 13
CA
1
1 1CALCIUM ION
lig 14
CA
1
2 1CALCIUM ION
lig 15
CA
1
3 1CALCIUM ION
lig 16
CA
1
4 1CALCIUM ION
lig 17
CL
1
5 1CHLORIDE ION
lig 18
CA
2
1 1CALCIUM ION
lig 19
CA
2
2 1CALCIUM ION
lig 20
CA
2
3 1CALCIUM ION
lig 21
CL
2
4 1CHLORIDE ION
lig 22
CA
3
1 1CALCIUM ION
lig 23
CA
3
2 1CALCIUM ION
lig 24
CA
3
3 1CALCIUM ION
lig 25
CL
3
4 1CHLORIDE ION