Analysis of Ligand-Protein Contacts in PDB entry:
2PT3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 29 ligands in PDB entry 2PT3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
198 10PHOSPHOSERINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
MAN
B
3 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
CA
A
606 1CALCIUM ION
lig 13
PO4
A
607 5PHOSPHATE ION
lig 14
PO4
A
608 5PHOSPHATE ION
lig 15
PO4
A
609 5PHOSPHATE ION
lig 16
PO4
A
610 5PHOSPHATE ION
lig 17
PO4
A
611 5PHOSPHATE ION
lig 18
PO4
A
612 5PHOSPHATE ION
lig 19
PO4
A
613 5PHOSPHATE ION
lig 20
PO4
A
614 5PHOSPHATE ION
lig 21
PO4
A
615 5PHOSPHATE ION
lig 22
PO4
A
616 5PHOSPHATE ION
lig 23
PO4
A
617 5PHOSPHATE ION
lig 24
PO4
A
618 5PHOSPHATE ION
lig 25
PO4
A
619 5PHOSPHATE ION
lig 26
PO4
A
620 5PHOSPHATE ION
lig 27
PO4
A
621 5PHOSPHATE ION
lig 28
PO4
A
622 5PHOSPHATE ION
lig 29
HEM
A
623 43PROTOPORPHYRIN IX CONTAINING FE