Analysis of Ligand-Protein Contacts in PDB entry:
2VBI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 2VBI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
1000 1MAGNESIUM ION
lig 2
TPP
A
2000 26THIAMINE DIPHOSPHATE
lig 3
MG
B
1000 1MAGNESIUM ION
lig 4
TPP
B
2000 26THIAMINE DIPHOSPHATE
lig 5
MG
C
1000 1MAGNESIUM ION
lig 6
TPP
C
2000 26THIAMINE DIPHOSPHATE
lig 7
MG
D
1000 1MAGNESIUM ION
lig 8
TPP
D
2000 26THIAMINE DIPHOSPHATE
lig 9
MG
E
1000 1MAGNESIUM ION
lig 10
TPP
E
2000 26THIAMINE DIPHOSPHATE
lig 11
MG
F
1000 1MAGNESIUM ION
lig 12
TPP
F
2000 26THIAMINE DIPHOSPHATE
lig 13
MG
G
1000 1MAGNESIUM ION
lig 14
TPP
G
2000 26THIAMINE DIPHOSPHATE
lig 15
MG
H
1000 1MAGNESIUM ION
lig 16
TPP
H
2000 26THIAMINE DIPHOSPHATE