Analysis of Ligand-Protein Contacts in PDB entry:
2VC5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 2VC5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
KCX
A
137 12LYSINE NZ-CARBOXYLIC ACID
lig 2
KCX
B
137 12LYSINE NZ-CARBOXYLIC ACID
lig 3
KCX
C
137 12LYSINE NZ-CARBOXYLIC ACID
lig 4
KCX
D
137 12LYSINE NZ-CARBOXYLIC ACID
lig 5
FE2
A
1315 1FE (II) ION
lig 6
CO
A
1316 1COBALT (II) ION
lig 7
EDO
A
1317 41,2-ETHANEDIOL
lig 8
GOL
A
1318 6GLYCEROL
lig 9
EDO
A
1319 41,2-ETHANEDIOL
lig 10
EDO
A
1320 41,2-ETHANEDIOL
lig 11
GOL
A
1321 6GLYCEROL
lig 12
FE2
B
1315 1FE (II) ION
lig 13
CO
B
1316 1COBALT (II) ION
lig 14
EDO
B
1317 41,2-ETHANEDIOL
lig 15
GOL
B
1318 6GLYCEROL
lig 16
GOL
B
1319 6GLYCEROL
lig 17
GOL
B
1320 6GLYCEROL
lig 18
EDO
B
1321 41,2-ETHANEDIOL
lig 19
EDO
B
1322 41,2-ETHANEDIOL
lig 20
EDO
B
1323 41,2-ETHANEDIOL
lig 21
EDO
B
1324 41,2-ETHANEDIOL
lig 22
FE2
C
1315 1FE (II) ION
lig 23
CO
C
1316 1COBALT (II) ION
lig 24
EDO
C
1317 41,2-ETHANEDIOL
lig 25
EDO
C
1318 41,2-ETHANEDIOL
lig 26
EDO
C
1319 41,2-ETHANEDIOL
lig 27
FE2
D
1315 1FE (II) ION
lig 28
CO
D
1316 1COBALT (II) ION
lig 29
EDO
D
1317 41,2-ETHANEDIOL
lig 30
EDO
D
1318 41,2-ETHANEDIOL
lig 31
GOL
D
1319 6GLYCEROL
lig 32
EDO
D
1320 41,2-ETHANEDIOL
lig 33
EDO
D
1321 41,2-ETHANEDIOL