Analysis of Ligand-Protein Contacts in PDB entry:
2YDP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 2YDP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
EDG
A
500 91,4-DIDEOXY-1,4-IMINO-L-ARABINITOL
lig 2
AHR
A
501 9ALPHA-L-ARABINOFURANOSE
lig 3
CA
A
502 1CALCIUM ION
lig 4
EDG
B
500 91,4-DIDEOXY-1,4-IMINO-L-ARABINITOL
lig 5
AHR
B
501 9ALPHA-L-ARABINOFURANOSE
lig 6
CA
B
502 1CALCIUM ION
lig 7
EDG
C
500 91,4-DIDEOXY-1,4-IMINO-L-ARABINITOL
lig 8
AHR
C
501 9ALPHA-L-ARABINOFURANOSE
lig 9
CA
C
502 1CALCIUM ION