Analysis of Ligand-Protein Contacts in PDB entry:
2YDT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 2YDT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
EDG
A
500 91,4-DIDEOXY-1,4-IMINO-L-ARABINITOL
lig 2
AHR
A
501 9ALPHA-L-ARABINOFURANOSE
lig 3
SO4
A
1502 5SULFATE ION
lig 4
SO4
A
1503 5SULFATE ION
lig 5
SO4
A
1504 5SULFATE ION
lig 6
SO4
A
1505 5SULFATE ION
lig 7
SO4
A
1506 5SULFATE ION
lig 8
MN
A
1507 1MANGANESE (II) ION
lig 9
MN
A
1508 1MANGANESE (II) ION
lig 10
MN
A
1509 1MANGANESE (II) ION
lig 11
MN
A
1510 1MANGANESE (II) ION
lig 12
MN
A
1511 1MANGANESE (II) ION
lig 13
ACT
A
1512 4ACETATE ION