Analysis of Ligand-Protein Contacts in PDB entry:
2YK3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 2YK3. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
M3L
A
83 12N-TRIMETHYLLYSINE
lig 2
M3L
B
83 12N-TRIMETHYLLYSINE
lig 3
M3L
C
83 12N-TRIMETHYLLYSINE
lig 4
HEC
A
200 43HEME C
lig 5
SO4
A
1115 5SULFATE ION
lig 6
SO4
A
1116 5SULFATE ION
lig 7
SO4
A
1117 5SULFATE ION
lig 8
HEC
B
200 43HEME C
lig 9
SO4
B
1115 5SULFATE ION
lig 10
SO4
B
1116 5SULFATE ION
lig 11
HEC
C
200 43HEME C
lig 12
SO4
C
1115 5SULFATE ION
lig 13
SO4
C
1116 5SULFATE ION