Analysis of Ligand-Protein Contacts in PDB entry:
2YNQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 2YNQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MLI
A
1391 7MALONATE ION
lig 2
NA
A
1392 1SODIUM ION
lig 3
NA
A
1393 1SODIUM ION
lig 4
CL
A
1394 1CHLORIDE ION
lig 5
MLI
B
1390 7MALONATE ION
lig 6
NA
B
1391 1SODIUM ION
lig 7
CL
B
1392 1CHLORIDE ION
lig 8
MLI
C
1390 7MALONATE ION
lig 9
NA
C
1391 1SODIUM ION
lig 10
CL
C
1392 1CHLORIDE ION
lig 11
NA
D
1391 1SODIUM ION
lig 12
GOL
D
1392 6GLYCEROL