Analysis of Ligand-Protein Contacts in PDB entry:
2AEP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 2AEP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
GLC
A
702 12ALPHA-D-GLUCOPYRANOSE
lig 9
NAG
A
686 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
A
646 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
A
634 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
629 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
CA
A
601 1CALCIUM ION
lig 14
SO4
A
602 5SULFATE ION
lig 15
GLC
H
701 12ALPHA-D-GLUCOPYRANOSE
lig 16
MAN
L
217 11ALPHA-D-MANNOPYRANOSE