Analysis of Ligand-Protein Contacts in PDB entry:
2AF6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 40 ligands in PDB entry 2AF6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
IOD
A
3001 1IODIDE ION
lig 2
IOD
A
3008 1IODIDE ION
lig 3
FAD
A
4600 53FLAVIN-ADENINE DINUCLEOTIDE
lig 4
BRU
A
4603 215-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 5
GOL
A
2001 6GLYCEROL
lig 6
GOL
A
2010 6GLYCEROL
lig 7
GOL
A
2013 6GLYCEROL
lig 8
FAD
B
3600 53FLAVIN-ADENINE DINUCLEOTIDE
lig 9
BRU
B
3603 215-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 10
GOL
B
2002 6GLYCEROL
lig 11
GOL
B
2008 6GLYCEROL
lig 12
IOD
C
3009 1IODIDE ION
lig 13
FAD
C
2600 53FLAVIN-ADENINE DINUCLEOTIDE
lig 14
BRU
C
2603 215-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 15
GOL
C
2003 6GLYCEROL
lig 16
IOD
D
3002 1IODIDE ION
lig 17
IOD
D
3004 1IODIDE ION
lig 18
FAD
D
1600 53FLAVIN-ADENINE DINUCLEOTIDE
lig 19
BRU
D
1603 215-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 20
GOL
D
2009 6GLYCEROL
lig 21
GOL
D
2012 6GLYCEROL
lig 22
IOD
E
3006 1IODIDE ION
lig 23
IOD
E
3007 1IODIDE ION
lig 24
FAD
E
8600 53FLAVIN-ADENINE DINUCLEOTIDE
lig 25
BRU
E
8603 215-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 26
GOL
E
2004 6GLYCEROL
lig 27
GOL
E
2011 6GLYCEROL
lig 28
IOD
F
3005 1IODIDE ION
lig 29
IOD
F
3010 1IODIDE ION
lig 30
FAD
F
7600 53FLAVIN-ADENINE DINUCLEOTIDE
lig 31
BRU
F
7603 215-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 32
GOL
F
2007 6GLYCEROL
lig 33
GOL
F
2014 6GLYCEROL
lig 34
IOD
G
3003 1IODIDE ION
lig 35
FAD
G
6600 53FLAVIN-ADENINE DINUCLEOTIDE
lig 36
BRU
G
6603 215-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 37
GOL
G
2005 6GLYCEROL
lig 38
FAD
H
5600 53FLAVIN-ADENINE DINUCLEOTIDE
lig 39
BRU
H
5603 215-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 40
GOL
H
2006 6GLYCEROL