Analysis of Ligand-Protein Contacts in PDB entry:
2AXT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 180 ligands in PDB entry 2AXT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FE2
A
557 1FE (II) ION
lig 2
CLA
A
558 65CHLOROPHYLL A
lig 3
CLA
A
559 65CHLOROPHYLL A
lig 4
CLA
A
560 65CHLOROPHYLL A
lig 5
PHO
A
561 64PHEOPHYTIN A
lig 6
PHO
A
562 64PHEOPHYTIN A
lig 7
CLA
A
563 55CHLOROPHYLL A
lig 8
PQ9
A
564 30 DIMETHYLBENZO-1,4-QUINONE
lig 9
OEC
A
565 5OXYGEN EVOLVING SYSTEM
lig 10
BCR
A
566 40BETA-CAROTENE
lig 11
LHG
A
567 391,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 12
SQD
A
568 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 13
LMT
A
569 35DODECYL-BETA-D-MALTOSIDE
lig 14
SQD
A
5212 26 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 15
CLA
B
511 41CHLOROPHYLL A
lig 16
CLA
B
512 65CHLOROPHYLL A
lig 17
CLA
B
513 65CHLOROPHYLL A
lig 18
CLA
B
514 65CHLOROPHYLL A
lig 19
CLA
B
515 65CHLOROPHYLL A
lig 20
CLA
B
516 65CHLOROPHYLL A
lig 21
CLA
B
517 65CHLOROPHYLL A
lig 22
CLA
B
518 65CHLOROPHYLL A
lig 23
CLA
B
519 65CHLOROPHYLL A
lig 24
CLA
B
520 65CHLOROPHYLL A
lig 25
CLA
B
521 65CHLOROPHYLL A
lig 26
CLA
B
522 65CHLOROPHYLL A
lig 27
CLA
B
523 65CHLOROPHYLL A
lig 28
CLA
B
524 56CHLOROPHYLL A
lig 29
CLA
B
525 65CHLOROPHYLL A
lig 30
CLA
B
526 65CHLOROPHYLL A
lig 31
BCR
B
527 40BETA-CAROTENE
lig 32
BCR
B
528 40BETA-CAROTENE
lig 33
BCR
B
529 40BETA-CAROTENE
lig 34
MGE
B
530 48 METHYL]ETHYL PALMITATE
lig 35
UNL
C
474 15UNKNOWN LIGAND
lig 36
UNL
C
475 12UNKNOWN LIGAND
lig 37
UNL
C
476 9UNKNOWN LIGAND
lig 38
UNL
C
477 7UNKNOWN LIGAND
lig 39
UNL
C
478 11UNKNOWN LIGAND
lig 40
UNL
C
479 11UNKNOWN LIGAND
lig 41
UNL
C
480 7UNKNOWN LIGAND
lig 42
UNL
C
481 13UNKNOWN LIGAND
lig 43
UNL
C
482 13UNKNOWN LIGAND
lig 44
UNL
C
483 13UNKNOWN LIGAND
lig 45
UNL
C
484 5UNKNOWN LIGAND
lig 46
UNL
C
485 5UNKNOWN LIGAND
lig 47
UNL
C
486 8UNKNOWN LIGAND
lig 48
UNL
C
487 7UNKNOWN LIGAND
lig 49
UNL
C
488 5UNKNOWN LIGAND
lig 50
UNL
C
489 7UNKNOWN LIGAND
lig 51
UNL
C
490 4UNKNOWN LIGAND
lig 52
CLA
C
491 65CHLOROPHYLL A
lig 53
CLA
C
492 60CHLOROPHYLL A
lig 54
CLA
C
493 65CHLOROPHYLL A
lig 55
CLA
C
494 46CHLOROPHYLL A
lig 56
CLA
C
495 65CHLOROPHYLL A
lig 57
CLA
C
496 65CHLOROPHYLL A
lig 58
CLA
C
497 65CHLOROPHYLL A
lig 59
CLA
C
498 65CHLOROPHYLL A
lig 60
CLA
C
499 47CHLOROPHYLL A
lig 61
CLA
C
500 65CHLOROPHYLL A
lig 62
CLA
C
501 65CHLOROPHYLL A
lig 63
CLA
C
502 51CHLOROPHYLL A
lig 64
CLA
C
503 50CHLOROPHYLL A
lig 65
BCR
C
504 40BETA-CAROTENE
lig 66
BCR
C
505 40BETA-CAROTENE
lig 67
BCR
C
506 40BETA-CAROTENE
lig 68
DGD
C
507 53DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 69
DGD
C
508 47DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 70
DGD
C
509 57DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 71
BCT
D
353 4BICARBONATE ION
lig 72
CLA
D
354 65CHLOROPHYLL A
lig 73
CLA
D
355 50CHLOROPHYLL A
lig 74
PQ9
D
356 30 DIMETHYLBENZO-1,4-QUINONE
lig 75
BCR
D
357 40BETA-CAROTENE
lig 76
MGE
D
358 47 METHYL]ETHYL PALMITATE
lig 77
MGE
D
359 41 METHYL]ETHYL PALMITATE
lig 78
MGE
D
360 48 METHYL]ETHYL PALMITATE
lig 79
HEM
F
51 43PROTOPORPHYRIN IX CONTAINING FE
lig 80
BCR
H
107 40BETA-CAROTENE
lig 81
DGD
H
208 54DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 82
MGE
I
201 48 METHYL]ETHYL PALMITATE
lig 83
CA
K
56 1CALCIUM ION
lig 84
MGE
L
210 48 METHYL]ETHYL PALMITATE
lig 85
SQD
L
5213 47 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 86
LMT
M
5216 35DODECYL-BETA-D-MALTOSIDE
lig 87
LMT
T
217 35DODECYL-BETA-D-MALTOSIDE
lig 88
BCR
T
5104 40BETA-CAROTENE
lig 89
HEM
V
552 43PROTOPORPHYRIN IX CONTAINING FE
lig 90
BCR
X
130 40BETA-CAROTENE
lig 91
FE2
a
5557 1FE (II) ION
lig 92
SQD
a
212 26 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 93
CLA
a
5558 65CHLOROPHYLL A
lig 94
CLA
a
5559 65CHLOROPHYLL A
lig 95
CLA
a
5560 65CHLOROPHYLL A
lig 96
PHO
a
5561 64PHEOPHYTIN A
lig 97
PHO
a
5562 64PHEOPHYTIN A
lig 98
CLA
a
5563 55CHLOROPHYLL A
lig 99
PQ9
a
5564 30 DIMETHYLBENZO-1,4-QUINONE
lig 100
OEC
a
5565 5OXYGEN EVOLVING SYSTEM
lig 101
BCR
a
5566 40BETA-CAROTENE
lig 102
LHG
a
5567 391,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 103
LMT
a
5568 35DODECYL-BETA-D-MALTOSIDE
lig 104
CLA
b
5511 41CHLOROPHYLL A
lig 105
CLA
b
5512 65CHLOROPHYLL A
lig 106
CLA
b
5513 65CHLOROPHYLL A
lig 107
CLA
b
5514 65CHLOROPHYLL A
lig 108
CLA
b
5515 65CHLOROPHYLL A
lig 109
CLA
b
5516 65CHLOROPHYLL A
lig 110
CLA
b
5517 65CHLOROPHYLL A
lig 111
CLA
b
5518 65CHLOROPHYLL A
lig 112
CLA
b
5519 65CHLOROPHYLL A
lig 113
CLA
b
5520 65CHLOROPHYLL A
lig 114
CLA
b
5521 65CHLOROPHYLL A
lig 115
CLA
b
5522 65CHLOROPHYLL A
lig 116
CLA
b
5523 65CHLOROPHYLL A
lig 117
CLA
b
5524 56CHLOROPHYLL A
lig 118
CLA
b
5525 65CHLOROPHYLL A
lig 119
CLA
b
5526 65CHLOROPHYLL A
lig 120
BCR
b
5527 40BETA-CAROTENE
lig 121
BCR
b
5528 40BETA-CAROTENE
lig 122
BCR
b
5529 40BETA-CAROTENE
lig 123
MGE
b
5530 48 METHYL]ETHYL PALMITATE
lig 124
UNL
c
5474 15UNKNOWN LIGAND
lig 125
UNL
c
5475 12UNKNOWN LIGAND
lig 126
UNL
c
5476 9UNKNOWN LIGAND
lig 127
UNL
c
5477 7UNKNOWN LIGAND
lig 128
UNL
c
5478 11UNKNOWN LIGAND
lig 129
UNL
c
5479 11UNKNOWN LIGAND
lig 130
UNL
c
5480 7UNKNOWN LIGAND
lig 131
UNL
c
5481 13UNKNOWN LIGAND
lig 132
UNL
c
5482 13UNKNOWN LIGAND
lig 133
UNL
c
5483 13UNKNOWN LIGAND
lig 134
UNL
c
5484 5UNKNOWN LIGAND
lig 135
UNL
c
5485 5UNKNOWN LIGAND
lig 136
UNL
c
5486 8UNKNOWN LIGAND
lig 137
UNL
c
5487 7UNKNOWN LIGAND
lig 138
UNL
c
5488 5UNKNOWN LIGAND
lig 139
UNL
c
5489 7UNKNOWN LIGAND
lig 140
UNL
c
5490 4UNKNOWN LIGAND
lig 141
CLA
c
5491 65CHLOROPHYLL A
lig 142
CLA
c
5492 60CHLOROPHYLL A
lig 143
CLA
c
5493 65CHLOROPHYLL A
lig 144
CLA
c
5494 46CHLOROPHYLL A
lig 145
CLA
c
5495 65CHLOROPHYLL A
lig 146
CLA
c
5496 65CHLOROPHYLL A
lig 147
CLA
c
5497 65CHLOROPHYLL A
lig 148
CLA
c
5498 65CHLOROPHYLL A
lig 149
CLA
c
5499 47CHLOROPHYLL A
lig 150
CLA
c
5500 65CHLOROPHYLL A
lig 151
CLA
c
5501 65CHLOROPHYLL A
lig 152
CLA
c
5502 51CHLOROPHYLL A
lig 153
CLA
c
5503 50CHLOROPHYLL A
lig 154
BCR
c
5504 40BETA-CAROTENE
lig 155
BCR
c
5505 40BETA-CAROTENE
lig 156
BCR
c
5506 40BETA-CAROTENE
lig 157
DGD
c
5507 53DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 158
DGD
c
5508 47DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 159
DGD
c
5509 57DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 160
BCT
d
5353 4BICARBONATE ION
lig 161
CLA
d
5354 65CHLOROPHYLL A
lig 162
CLA
d
5355 50CHLOROPHYLL A
lig 163
PQ9
d
5356 30 DIMETHYLBENZO-1,4-QUINONE
lig 164
BCR
d
5357 40BETA-CAROTENE
lig 165
SQD
d
5358 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 166
MGE
d
5359 47 METHYL]ETHYL PALMITATE
lig 167
MGE
d
5360 41 METHYL]ETHYL PALMITATE
lig 168
MGE
d
5361 48 METHYL]ETHYL PALMITATE
lig 169
HEM
f
5051 43PROTOPORPHYRIN IX CONTAINING FE
lig 170
BCR
h
5107 40BETA-CAROTENE
lig 171
DGD
h
5208 54DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 172
MGE
i
5201 48 METHYL]ETHYL PALMITATE
lig 173
CA
k
5056 1CALCIUM ION
lig 174
MGE
l
5210 48 METHYL]ETHYL PALMITATE
lig 175
LMT
m
216 35DODECYL-BETA-D-MALTOSIDE
lig 176
BCR
t
104 40BETA-CAROTENE
lig 177
SQD
t
213 47 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 178
LMT
t
5217 35DODECYL-BETA-D-MALTOSIDE
lig 179
HEM
v
5552 43PROTOPORPHYRIN IX CONTAINING FE
lig 180
BCR
x
5130 40BETA-CAROTENE