Analysis of Ligand-Protein Contacts in PDB entry:
2B8H


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 85 ligands in PDB entry 2B8H. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
F
9 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
H
7 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
H
8 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
H
9 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
H
10 11ALPHA-D-MANNOPYRANOSE
lig 24
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 29
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
J
6 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
J
7 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
J
8 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
J
9 11ALPHA-D-MANNOPYRANOSE
lig 35
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 40
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 41
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 42
MAN
L
6 11ALPHA-D-MANNOPYRANOSE
lig 43
MAN
L
7 11ALPHA-D-MANNOPYRANOSE
lig 44
MAN
L
8 11ALPHA-D-MANNOPYRANOSE
lig 45
MAN
L
9 11ALPHA-D-MANNOPYRANOSE
lig 46
NAG
A
500 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
SO4
A
1513 5SULFATE ION
lig 48
SO4
A
1514 5SULFATE ION
lig 49
SO4
A
1515 5SULFATE ION
lig 50
SO4
A
1517 5SULFATE ION
lig 51
SO4
A
1518 5SULFATE ION
lig 52
SO4
A
1519 5SULFATE ION
lig 53
SO4
A
1520 5SULFATE ION
lig 54
CL
A
1522 1CHLORIDE ION
lig 55
SO4
A
2516 5SULFATE ION
lig 56
GOL
A
5001 6GLYCEROL
lig 57
GOL
A
5002 6GLYCEROL
lig 58
GOL
A
5003 6GLYCEROL
lig 59
NAG
B
500 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
SO4
B
2513 5SULFATE ION
lig 61
SO4
B
2514 5SULFATE ION
lig 62
SO4
B
2515 5SULFATE ION
lig 63
SO4
B
2519 5SULFATE ION
lig 64
SO4
B
2520 5SULFATE ION
lig 65
CL
B
2522 1CHLORIDE ION
lig 66
SO4
B
3516 5SULFATE ION
lig 67
NAG
C
500 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
SO4
C
3513 5SULFATE ION
lig 69
SO4
C
3514 5SULFATE ION
lig 70
SO4
C
3515 5SULFATE ION
lig 71
SO4
C
3517 5SULFATE ION
lig 72
SO4
C
3518 5SULFATE ION
lig 73
SO4
C
3519 5SULFATE ION
lig 74
SO4
C
3520 5SULFATE ION
lig 75
SO4
C
3521 5SULFATE ION
lig 76
CL
C
3522 1CHLORIDE ION
lig 77
SO4
C
4516 5SULFATE ION
lig 78
NAG
D
500 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
SO4
D
1516 5SULFATE ION
lig 80
SO4
D
4513 5SULFATE ION
lig 81
SO4
D
4514 5SULFATE ION
lig 82
SO4
D
4515 5SULFATE ION
lig 83
SO4
D
4519 5SULFATE ION
lig 84
SO4
D
4520 5SULFATE ION
lig 85
CL
D
4522 1CHLORIDE ION