Analysis of Ligand-Protein Contacts in PDB entry:
2CML


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 2CML. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
F
1 11ALPHA-D-MANNOPYRANOSE
lig 4
MAN
F
2 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
F
3 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
ZMR
A
1477 23ZANAMIVIR
lig 16
ZMR
A
1478 23ZANAMIVIR
lig 17
CA
A
1479 1CALCIUM ION
lig 18
NAG
A
1482 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
A
1483 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
BMA
A
1709 11BETA-D-MANNOPYRANOSE
lig 21
ZMR
B
2477 23ZANAMIVIR
lig 22
ZMR
B
2478 23ZANAMIVIR
lig 23
CA
B
2479 1CALCIUM ION
lig 24
NAG
B
2480 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
B
2481 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
B
2482 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
B
2483 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
MAN
B
2484 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
B
2485 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
B
2486 11ALPHA-D-MANNOPYRANOSE
lig 31
ZMR
C
3477 23ZANAMIVIR
lig 32
ZMR
C
3478 23ZANAMIVIR
lig 33
CA
C
3479 1CALCIUM ION
lig 34
MAN
C
3484 11ALPHA-D-MANNOPYRANOSE
lig 35
NAG
C
3486 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
C
3487 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
C
3488 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
MAN
C
3490 11ALPHA-D-MANNOPYRANOSE
lig 39
MAN
C
3492 11ALPHA-D-MANNOPYRANOSE
lig 40
BMA
C
3493 11BETA-D-MANNOPYRANOSE
lig 41
ZMR
D
4477 23ZANAMIVIR
lig 42
ZMR
D
4478 23ZANAMIVIR
lig 43
CA
D
4479 1CALCIUM ION
lig 44
MAN
D
4480 11ALPHA-D-MANNOPYRANOSE
lig 45
MAN
D
4481 11ALPHA-D-MANNOPYRANOSE
lig 46
NAG
D
4482 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
D
4483 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
BMA
D
4486 11BETA-D-MANNOPYRANOSE