Analysis of Ligand-Protein Contacts in PDB entry:
2D4E


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 2D4E. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
A
1901 1SODIUM ION
lig 2
GOL
A
1801 6GLYCEROL
lig 3
NA
B
1902 1SODIUM ION
lig 4
GOL
B
1802 6GLYCEROL
lig 5
NA
C
1903 1SODIUM ION
lig 6
NA
C
1905 1SODIUM ION
lig 7
NAD
C
1701 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 8
GOL
C
1803 6GLYCEROL
lig 9
NA
D
1904 1SODIUM ION
lig 10
NA
D
1906 1SODIUM ION
lig 11
NAD
D
1702 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE