Analysis of Ligand-Protein Contacts in PDB entry:
2DDE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 5 ligands in PDB entry 2DDE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DAL
A
4 5D-ALANINE
lig 2
DBB
A
11 6D-ALPHA-AMINOBUTYRIC ACID
lig 3
BH2
A
15 9(3R)-3-HYDROXY-L-ASPARTIC ACID
lig 4
DBB
A
18 6D-ALPHA-AMINOBUTYRIC ACID
lig 5
LSP
A
100 16 PHOSPHAUNDECAN-1-AMINIUM 4-OXIDE