Analysis of Ligand-Protein Contacts in PDB entry:
2DEM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 2DEM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ORP
C
8 122-DEOXY-5-PHOSPHONO-RIBOSE
lig 2
2HP
D
1002 5DIHYDROGENPHOSPHATE ION
lig 3
SF4
A
220 8IRON/SULFUR CLUSTER
lig 4
2HP
A
1001 5DIHYDROGENPHOSPHATE ION
lig 5
GOL
A
1003 6GLYCEROL
lig 6
GOL
A
1004 6GLYCEROL
lig 7
EOH
A
1005 3ETHANOL