Analysis of Ligand-Protein Contacts in PDB entry:
2DGK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 2DGK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
4770 5SULFATE ION
lig 2
PLP
A
1500 15PYRIDOXAL-5'-PHOSPHATE
lig 3
EDO
A
2193 41,2-ETHANEDIOL
lig 4
SO4
B
4771 5SULFATE ION
lig 5
PLP
B
1501 15PYRIDOXAL-5'-PHOSPHATE
lig 6
EDO
B
2191 41,2-ETHANEDIOL
lig 7
EDO
B
2194 41,2-ETHANEDIOL
lig 8
SO4
C
4772 5SULFATE ION
lig 9
PLP
C
1502 15PYRIDOXAL-5'-PHOSPHATE
lig 10
EDO
C
2192 41,2-ETHANEDIOL
lig 11
EDO
C
2195 41,2-ETHANEDIOL
lig 12
SO4
D
4773 5SULFATE ION
lig 13
PLP
D
1503 15PYRIDOXAL-5'-PHOSPHATE
lig 14
EDO
D
2196 41,2-ETHANEDIOL
lig 15
SO4
E
4774 5SULFATE ION
lig 16
PLP
E
1504 15PYRIDOXAL-5'-PHOSPHATE
lig 17
EDO
E
2197 41,2-ETHANEDIOL
lig 18
SO4
F
4775 5SULFATE ION
lig 19
PLP
F
1505 15PYRIDOXAL-5'-PHOSPHATE
lig 20
EDO
F
2198 41,2-ETHANEDIOL