Analysis of Ligand-Protein Contacts in PDB entry:
2DP8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 2DP8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
MAN
C
3 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
E
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
FE
A
690 1FE (III) ION
lig 18
CO3
A
691 4CARBONATE ION
lig 19
ZN
A
692 1ZINC ION
lig 20
ZN
A
693 1ZINC ION
lig 21
SO4
A
694 5SULFATE ION