Analysis of Ligand-Protein Contacts in PDB entry:
2DU0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 2DU0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 3
NAG
E
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
F
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
FUC
G
2 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
FUC
H
2 10ALPHA-L-FUCOPYRANOSE
lig 11
NAG
H
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
GLA
A
1401 12ALPHA-D-GALACTOPYRANOSE
lig 13
NAG
A
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
CA
A
1303 1CALCIUM ION
lig 15
MN
A
1300 1MANGANESE (II) ION
lig 16
GLA
B
2401 12ALPHA-D-GALACTOPYRANOSE
lig 17
CA
B
2303 1CALCIUM ION
lig 18
MN
B
2300 1MANGANESE (II) ION
lig 19
GLA
C
3401 12ALPHA-D-GALACTOPYRANOSE
lig 20
NAG
C
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
CA
C
3303 1CALCIUM ION
lig 22
MN
C
3300 1MANGANESE (II) ION
lig 23
GLA
D
4401 12ALPHA-D-GALACTOPYRANOSE
lig 24
NAG
D
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
CA
D
4303 1CALCIUM ION
lig 26
MN
D
4300 1MANGANESE (II) ION