Analysis of Ligand-Protein Contacts in PDB entry:
2E53


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 44 ligands in PDB entry 2E53. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
FUC
E
4 10ALPHA-L-FUCOPYRANOSE
lig 5
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
F
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
GLA
G
1 12ALPHA-D-GALACTOPYRANOSE
lig 9
GLA
G
2 11ALPHA-D-GALACTOPYRANOSE
lig 10
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 13
FUC
H
4 10ALPHA-L-FUCOPYRANOSE
lig 14
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
FUC
I
2 10ALPHA-L-FUCOPYRANOSE
lig 16
NDG
I
3 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 17
GLA
J
1 12ALPHA-D-GALACTOPYRANOSE
lig 18
GLA
J
2 11ALPHA-D-GALACTOPYRANOSE
lig 19
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 22
FUC
K
4 10ALPHA-L-FUCOPYRANOSE
lig 23
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
GLA
M
1 12ALPHA-D-GALACTOPYRANOSE
lig 26
GLA
M
2 11ALPHA-D-GALACTOPYRANOSE
lig 27
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 30
FUC
N
4 10ALPHA-L-FUCOPYRANOSE
lig 31
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 34
FUC
O
4 10ALPHA-L-FUCOPYRANOSE
lig 35
GLA
P
1 12ALPHA-D-GALACTOPYRANOSE
lig 36
GLA
P
2 11ALPHA-D-GALACTOPYRANOSE
lig 37
CA
A
1303 1CALCIUM ION
lig 38
MN
A
1300 1MANGANESE (II) ION
lig 39
CA
B
2303 1CALCIUM ION
lig 40
MN
B
2300 1MANGANESE (II) ION
lig 41
CA
C
3303 1CALCIUM ION
lig 42
MN
C
3300 1MANGANESE (II) ION
lig 43
CA
D
4303 1CALCIUM ION
lig 44
MN
D
4300 1MANGANESE (II) ION