Analysis of Ligand-Protein Contacts in PDB entry:
2GBL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 28 ligands in PDB entry 2GBL. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
431 10PHOSPHOSERINE
lig 2
TPO
A
432 11PHOSPHOTHREONINE
lig 3
SEP
B
431 10PHOSPHOSERINE
lig 4
TPO
B
432 11PHOSPHOTHREONINE
lig 5
TPO
C
432 11PHOSPHOTHREONINE
lig 6
TPO
D
432 11PHOSPHOTHREONINE
lig 7
SEP
E
431 10PHOSPHOSERINE
lig 8
TPO
E
432 11PHOSPHOTHREONINE
lig 9
SEP
F
431 10PHOSPHOSERINE
lig 10
TPO
F
432 11PHOSPHOTHREONINE
lig 11
MG
A
801 1MAGNESIUM ION
lig 12
ATP
A
901 31ADENOSINE-5'-TRIPHOSPHATE
lig 13
ATP
A
903 31ADENOSINE-5'-TRIPHOSPHATE
lig 14
MG
B
802 1MAGNESIUM ION
lig 15
ATP
B
901 31ADENOSINE-5'-TRIPHOSPHATE
lig 16
ATP
B
903 31ADENOSINE-5'-TRIPHOSPHATE
lig 17
MG
C
803 1MAGNESIUM ION
lig 18
ATP
C
901 31ADENOSINE-5'-TRIPHOSPHATE
lig 19
ATP
C
903 31ADENOSINE-5'-TRIPHOSPHATE
lig 20
MG
D
804 1MAGNESIUM ION
lig 21
ATP
D
901 31ADENOSINE-5'-TRIPHOSPHATE
lig 22
ATP
D
903 31ADENOSINE-5'-TRIPHOSPHATE
lig 23
MG
E
805 1MAGNESIUM ION
lig 24
ATP
E
901 31ADENOSINE-5'-TRIPHOSPHATE
lig 25
ATP
E
903 31ADENOSINE-5'-TRIPHOSPHATE
lig 26
MG
F
806 1MAGNESIUM ION
lig 27
ATP
F
901 31ADENOSINE-5'-TRIPHOSPHATE
lig 28
ATP
F
903 31ADENOSINE-5'-TRIPHOSPHATE