Analysis of Ligand-Protein Contacts in PDB entry:
2GMH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 2GMH. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BHG
A
616 18HEXYL BETA-D-GALACTOPYRANOSIDE
lig 2
BHG
A
617 18HEXYL BETA-D-GALACTOPYRANOSIDE
lig 3
NA
A
1070 1SODIUM ION
lig 4
SF4
A
610 8IRON/SULFUR CLUSTER
lig 5
FAD
A
611 53FLAVIN-ADENINE DINUCLEOTIDE
lig 6
UQ5
A
612 38 EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZO
lig 7
EDO
A
619 41,2-ETHANEDIOL
lig 8
EDO
A
621 41,2-ETHANEDIOL
lig 9
EDO
A
622 41,2-ETHANEDIOL
lig 10
EDO
A
623 41,2-ETHANEDIOL
lig 11
EDO
A
624 41,2-ETHANEDIOL
lig 12
EDO
A
625 41,2-ETHANEDIOL
lig 13
EDO
A
626 41,2-ETHANEDIOL
lig 14
EDO
A
627 41,2-ETHANEDIOL
lig 15
EDO
A
628 41,2-ETHANEDIOL
lig 16
BHG
B
618 18HEXYL BETA-D-GALACTOPYRANOSIDE
lig 17
SF4
B
613 8IRON/SULFUR CLUSTER
lig 18
FAD
B
614 53FLAVIN-ADENINE DINUCLEOTIDE
lig 19
UQ5
B
615 38 EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZO
lig 20
EDO
B
620 41,2-ETHANEDIOL