Analysis of Ligand-Protein Contacts in PDB entry:
2H88


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 86 ligands in PDB entry 2H88. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
K
A
622 1POTASSIUM ION
lig 2
AZI
A
623 3AZIDE ION
lig 3
FAD
A
1001 53FLAVIN-ADENINE DINUCLEOTIDE
lig 4
TEO
A
1002 9MALATE LIKE INTERMEDIATE
lig 5
UNL
A
1003 1UNKNOWN LIGAND
lig 6
UNL
A
1004 1UNKNOWN LIGAND
lig 7
UNL
A
1005 1UNKNOWN LIGAND
lig 8
UNL
A
1006 1UNKNOWN LIGAND
lig 9
UNL
A
1007 2UNKNOWN LIGAND
lig 10
UNL
A
1008 1UNKNOWN LIGAND
lig 11
K
B
253 1POTASSIUM ION
lig 12
FES
B
1002 4FE2/S2 (INORGANIC) CLUSTER
lig 13
SF4
B
1003 8IRON/SULFUR CLUSTER
lig 14
F3S
B
1004 7FE3-S4 CLUSTER
lig 15
UNL
B
1005 1UNKNOWN LIGAND
lig 16
UNL
B
1006 1UNKNOWN LIGAND
lig 17
UNL
B
1007 1UNKNOWN LIGAND
lig 18
UNL
B
1008 1UNKNOWN LIGAND
lig 19
GOL
B
1009 6GLYCEROL
lig 20
BHG
C
141 18HEXYL BETA-D-GALACTOPYRANOSIDE
lig 21
HEM
C
142 41PROTOPORPHYRIN IX CONTAINING FE
lig 22
UNL
C
143 2UNKNOWN LIGAND
lig 23
UNL
C
144 1UNKNOWN LIGAND
lig 24
UNL
C
145 4UNKNOWN LIGAND
lig 25
UNL
C
146 4UNKNOWN LIGAND
lig 26
UNL
C
147 1UNKNOWN LIGAND
lig 27
UNL
C
148 1UNKNOWN LIGAND
lig 28
UNL
C
149 1UNKNOWN LIGAND
lig 29
UNL
C
237 1UNKNOWN LIGAND
lig 30
UNL
C
238 1UNKNOWN LIGAND
lig 31
UNL
D
107 6UNKNOWN LIGAND
lig 32
UNL
D
108 1UNKNOWN LIGAND
lig 33
UNL
D
114 8UNKNOWN LIGAND
lig 34
UNL
D
116 10UNKNOWN LIGAND
lig 35
UNL
D
119 1UNKNOWN LIGAND
lig 36
UNL
D
249 1UNKNOWN LIGAND
lig 37
UNL
D
250 1UNKNOWN LIGAND
lig 38
UNL
D
251 1UNKNOWN LIGAND
lig 39
UNL
D
252 1UNKNOWN LIGAND
lig 40
UNL
D
253 1UNKNOWN LIGAND
lig 41
UNL
D
254 1UNKNOWN LIGAND
lig 42
K
N
622 1POTASSIUM ION
lig 43
AZI
N
623 3AZIDE ION
lig 44
FAD
N
1001 53FLAVIN-ADENINE DINUCLEOTIDE
lig 45
TEO
N
1002 9MALATE LIKE INTERMEDIATE
lig 46
UNL
N
1003 2UNKNOWN LIGAND
lig 47
UNL
N
1004 1UNKNOWN LIGAND
lig 48
UNL
N
1005 1UNKNOWN LIGAND
lig 49
UNL
N
1006 1UNKNOWN LIGAND
lig 50
UNL
N
1007 1UNKNOWN LIGAND
lig 51
UNL
N
1008 1UNKNOWN LIGAND
lig 52
UNL
N
1009 1UNKNOWN LIGAND
lig 53
UNL
N
1010 1UNKNOWN LIGAND
lig 54
UNL
N
1011 1UNKNOWN LIGAND
lig 55
UNL
N
1012 1UNKNOWN LIGAND
lig 56
K
O
253 1POTASSIUM ION
lig 57
FES
O
1002 4FE2/S2 (INORGANIC) CLUSTER
lig 58
SF4
O
1003 8IRON/SULFUR CLUSTER
lig 59
F3S
O
1004 7FE3-S4 CLUSTER
lig 60
UNL
O
1005 1UNKNOWN LIGAND
lig 61
UNL
O
1006 1UNKNOWN LIGAND
lig 62
UNL
O
1007 1UNKNOWN LIGAND
lig 63
UNL
O
1008 1UNKNOWN LIGAND
lig 64
GOL
O
1009 6GLYCEROL
lig 65
BHG
P
205 18HEXYL BETA-D-GALACTOPYRANOSIDE
lig 66
HEM
P
201 41PROTOPORPHYRIN IX CONTAINING FE
lig 67
UNL
P
208 1UNKNOWN LIGAND
lig 68
UNL
P
209 2UNKNOWN LIGAND
lig 69
UNL
P
214 4UNKNOWN LIGAND
lig 70
UNL
P
215 4UNKNOWN LIGAND
lig 71
UNL
P
216 1UNKNOWN LIGAND
lig 72
UNL
P
217 1UNKNOWN LIGAND
lig 73
UNL
P
220 2UNKNOWN LIGAND
lig 74
UNL
P
229 1UNKNOWN LIGAND
lig 75
UNL
P
230 1UNKNOWN LIGAND
lig 76
UNL
P
231 1UNKNOWN LIGAND
lig 77
UNL
P
232 1UNKNOWN LIGAND
lig 78
UNL
P
240 1UNKNOWN LIGAND
lig 79
UNL
P
241 1UNKNOWN LIGAND
lig 80
UNL
P
242 1UNKNOWN LIGAND
lig 81
UNL
Q
212 7UNKNOWN LIGAND
lig 82
UNL
Q
213 5UNKNOWN LIGAND
lig 83
UNL
Q
218 1UNKNOWN LIGAND
lig 84
UNL
Q
219 1UNKNOWN LIGAND
lig 85
UNL
Q
228 1UNKNOWN LIGAND
lig 86
UNL
Q
256 1UNKNOWN LIGAND