Analysis of Ligand-Protein Contacts in PDB entry:
2IPS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 2IPS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
B
3 11ALPHA-D-MANNOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NDG
E
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 11
CA
A
701 1CALCIUM ION
lig 12
SCN
A
702 3THIOCYANATE ION
lig 13
CO3
A
688 4CARBONATE ION
lig 14
IOD
A
703 1IODIDE ION
lig 15
IOD
A
704 1IODIDE ION
lig 16
IOD
A
705 1IODIDE ION
lig 17
IOD
A
706 1IODIDE ION
lig 18
IOD
A
707 1IODIDE ION
lig 19
IOD
A
606 1IODIDE ION
lig 20
HEM
A
708 43PROTOPORPHYRIN IX CONTAINING FE