Analysis of Ligand-Protein Contacts in PDB entry:
2JDM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 2JDM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CA
A
1115 1CALCIUM ION
lig 2
CA
A
1116 1CALCIUM ION
lig 3
SO4
A
1117 5SULFATE ION
lig 4
FUC
A
1118 11ALPHA-L-FUCOPYRANOSE
lig 5
CA
B
1115 1CALCIUM ION
lig 6
CA
B
1116 1CALCIUM ION
lig 7
MFU
B
1117 12METHYL ALPHA-L-FUCOPYRANOSIDE
lig 8
SO4
B
1118 5SULFATE ION
lig 9
CA
C
1115 1CALCIUM ION
lig 10
CA
C
1116 1CALCIUM ION
lig 11
MFU
C
1117 12METHYL ALPHA-L-FUCOPYRANOSIDE
lig 12
CA
D
1115 1CALCIUM ION
lig 13
CA
D
1116 1CALCIUM ION
lig 14
MFU
D
1117 12METHYL ALPHA-L-FUCOPYRANOSIDE