Analysis of Ligand-Protein Contacts in PDB entry:
2PLS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 2PLS. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACT
A
904 4ACETATE ION
lig 2
EDO
A
706 41,2-ETHANEDIOL
lig 3
EDO
A
712 41,2-ETHANEDIOL
lig 4
EDO
B
702 41,2-ETHANEDIOL
lig 5
FMT
B
804 3FORMIC ACID
lig 6
EDO
C
703 41,2-ETHANEDIOL
lig 7
EDO
C
709 41,2-ETHANEDIOL
lig 8
EDO
C
714 41,2-ETHANEDIOL
lig 9
FMT
C
802 3FORMIC ACID
lig 10
ACT
D
902 4ACETATE ION
lig 11
FMT
D
803 3FORMIC ACID
lig 12
ACT
E
903 4ACETATE ION
lig 13
EDO
E
704 41,2-ETHANEDIOL
lig 14
EDO
E
705 41,2-ETHANEDIOL
lig 15
EDO
F
701 41,2-ETHANEDIOL
lig 16
EDO
F
710 41,2-ETHANEDIOL
lig 17
EDO
F
713 41,2-ETHANEDIOL
lig 18
MG
G
603 1MAGNESIUM ION
lig 19
MG
H
601 1MAGNESIUM ION
lig 20
MG
H
602 1MAGNESIUM ION
lig 21
MG
I
605 1MAGNESIUM ION
lig 22
MG
I
606 1MAGNESIUM ION
lig 23
EDO
I
708 41,2-ETHANEDIOL
lig 24
FMT
I
801 3FORMIC ACID
lig 25
FMT
I
805 3FORMIC ACID
lig 26
MG
J
604 1MAGNESIUM ION
lig 27
EDO
J
711 41,2-ETHANEDIOL
lig 28
ACT
K
901 4ACETATE ION
lig 29
FMT
L
806 3FORMIC ACID