Analysis of Ligand-Protein Contacts in PDB entry:
2PNZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 2PNZ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
UDP
A
250 25URIDINE-5'-DIPHOSPHATE
lig 2
5GP
A
279 24GUANOSINE-5'-MONOPHOSPHATE
lig 3
MPD
A
251 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
MPD
A
252 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
MPD
A
282 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
MPD
B
280 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
MPD
B
281 8(4S)-2-METHYL-2,4-PENTANEDIOL