Analysis of Ligand-Protein Contacts in PDB entry:
2QT6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 40 ligands in PDB entry 2QT6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
BMA
C
4 11BETA-D-MANNOPYRANOSE
lig 5
BMA
C
5 11BETA-D-MANNOPYRANOSE
lig 6
BMA
C
6 11BETA-D-MANNOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 10
BMA
D
4 11BETA-D-MANNOPYRANOSE
lig 11
BMA
D
5 11BETA-D-MANNOPYRANOSE
lig 12
BMA
D
6 11BETA-D-MANNOPYRANOSE
lig 13
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
CU
A
501 1COPPER (II) ION
lig 18
CU
A
502 1COPPER (II) ION
lig 19
CU
A
503 1COPPER (II) ION
lig 20
CU
A
504 1COPPER (II) ION
lig 21
NAG
A
505 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
TLA
A
506 10L(+)-TARTARIC ACID
lig 23
GOL
A
507 6GLYCEROL
lig 24
MAN
A
508 11ALPHA-D-MANNOPYRANOSE
lig 25
CA
A
509 1CALCIUM ION
lig 26
CA
A
510 1CALCIUM ION
lig 27
CA
A
511 1CALCIUM ION
lig 28
CA
A
512 1CALCIUM ION
lig 29
CA
A
513 1CALCIUM ION
lig 30
CL
A
514 1CHLORIDE ION
lig 31
CL
A
515 1CHLORIDE ION
lig 32
CU
B
501 1COPPER (II) ION
lig 33
CU
B
502 1COPPER (II) ION
lig 34
CU
B
503 1COPPER (II) ION
lig 35
CU
B
504 1COPPER (II) ION
lig 36
PER
B
505 2PEROXIDE ION
lig 37
GOL
B
506 6GLYCEROL
lig 38
MAN
B
507 11ALPHA-D-MANNOPYRANOSE
lig 39
CA
B
508 1CALCIUM ION
lig 40
CL
B
509 1CHLORIDE ION